Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89881 | Canola | plastid | 79.44 | 86.35 |
| CDY69821 | Canola | plastid | 72.51 | 85.24 |
| Bra033411.1-P | Field mustard | mitochondrion | 77.71 | 84.87 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 77.71 | 84.67 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 76.84 | 83.92 |
| Bra030536.1-P | Field mustard | cytosol, peroxisome, plastid | 81.17 | 83.89 |
| AT4G03415.2 | Thale cress | plastid | 77.92 | 76.92 |
| KRH56012 | Soybean | nucleus | 72.08 | 70.7 |
| VIT_12s0059g01820.t01 | Wine grape | plastid | 72.29 | 70.61 |
| KRH25524 | Soybean | nucleus | 71.86 | 70.49 |
| PGSC0003DMT400047180 | Potato | plastid | 71.64 | 70.13 |
| KRH22416 | Soybean | nucleus, plastid | 71.64 | 69.68 |
| Solyc07g054300.2.1 | Tomato | plastid | 71.0 | 69.49 |
| Solyc10g008490.2.1 | Tomato | plastid | 69.91 | 68.87 |
| KRH26917 | Soybean | cytosol, plastid | 70.35 | 68.57 |
| PGSC0003DMT400055813 | Potato | plastid | 69.26 | 68.09 |
| EER99559 | Sorghum | plastid | 54.33 | 58.24 |
| GSMUA_Achr9P24510_001 | Banana | plastid | 52.16 | 57.38 |
| Os07t0566200-01 | Rice | plasma membrane | 53.03 | 57.38 |
| Zm00001d006614_P001 | Maize | plastid | 53.46 | 57.18 |
| TraesCS2D01G214200.1 | Wheat | cytosol, peroxisome, plastid | 53.25 | 57.08 |
| TraesCS2A01G201900.1 | Wheat | cytosol, peroxisome, plastid | 52.81 | 57.01 |
| Zm00001d021817_P001 | Maize | plastid | 53.03 | 56.84 |
| HORVU2Hr1G039710.1 | Barley | cytosol, peroxisome, plastid | 53.03 | 56.84 |
| TraesCS2B01G229000.1 | Wheat | cytosol, peroxisome, plastid | 52.81 | 56.61 |
| HORVU2Hr1G084080.1 | Barley | cytosol, plastid | 16.88 | 50.0 |
| AT1G16220.1 | Thale cress | nucleus | 46.32 | 43.58 |
| AT1G79630.1 | Thale cress | nucleus | 47.19 | 43.25 |
| AT5G36250.2 | Thale cress | plastid | 43.07 | 43.07 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 35.06 | 42.41 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 30.09 | 41.99 |
| AT3G02750.3 | Thale cress | plastid | 47.84 | 41.94 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 32.47 | 41.9 |
| AT4G32950.1 | Thale cress | cytosol | 29.0 | 41.1 |
| AT3G16800.2 | Thale cress | nucleus | 29.65 | 39.03 |
| AT5G27930.1 | Thale cress | nucleus | 31.39 | 38.87 |
| AT3G06270.1 | Thale cress | cytosol | 19.26 | 25.57 |
| AT2G20050.1 | Thale cress | cytosol | 26.41 | 11.15 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:839447 | UniProt:A0A178W5G0 |
| ProteinID:AAF86530.1 | EMBL:AB079670 | ProteinID:AEE27587.1 | ArrayExpress:AT1G03590 | EnsemblPlantsGene:AT1G03590 | RefSeq:AT1G03590 |
| TAIR:AT1G03590 | RefSeq:AT1G03590-TAIR-G | EnsemblPlants:AT1G03590.1 | TAIR:AT1G03590.1 | Unigene:At.42536 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 |
| RefSeq:NP_171856.4 | ProteinID:OAP13717.1 | PFAM:PF00481 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF193 | UniProt:Q9LR65 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI00000A9F27 | SEG:seg | : | : | : | : |
Description
PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
Coordinates
chr1:-:894238..897718
Molecular Weight (calculated)
50978.2 Da
IEP (calculated)
5.017
GRAVY (calculated)
-0.422
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.