Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40298 | Canola | cytosol, peroxisome, plastid | 81.94 | 86.7 |
| Bra009643.1-P | Field mustard | cytosol, peroxisome, plastid | 81.41 | 86.15 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 70.94 | 70.39 |
| KRH76051 | Soybean | cytoskeleton, cytosol, peroxisome | 36.91 | 48.62 |
| KRH65540 | Soybean | cytosol | 24.87 | 46.34 |
| KRH00350 | Soybean | cytosol, peroxisome, plastid | 49.21 | 44.34 |
| KRH40835 | Soybean | nucleus, peroxisome, plastid | 50.0 | 44.01 |
| KRH65533 | Soybean | cytosol | 24.08 | 43.6 |
| VIT_08s0058g00660.t01 | Wine grape | cytosol | 44.5 | 43.15 |
| Os11t0109000-01 | Rice | cytosol, peroxisome, plastid | 47.38 | 43.1 |
| Solyc10g076320.1.1 | Tomato | nucleus | 48.95 | 42.89 |
| PGSC0003DMT400030965 | Potato | nucleus | 48.95 | 42.02 |
| KRH65575 | Soybean | cytosol | 11.78 | 40.91 |
| GSMUA_Achr7P22300_001 | Banana | cytosol, peroxisome, plastid | 45.03 | 40.86 |
| TraesCS5D01G155800.1 | Wheat | cytosol | 45.55 | 40.75 |
| TraesCS5A01G150700.1 | Wheat | cytosol | 45.55 | 40.75 |
| PGSC0003DMT400028836 | Potato | nucleus | 48.17 | 40.71 |
| Solyc10g085370.1.1 | Tomato | cytosol, nucleus, peroxisome | 48.17 | 40.62 |
| HORVU5Hr1G047410.12 | Barley | cytosol, peroxisome, plastid | 45.55 | 40.56 |
| TraesCS5B01G149300.1 | Wheat | cytosol | 45.29 | 40.52 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 35.08 | 40.48 |
| KRH65545 | Soybean | cytosol, peroxisome, plastid | 23.3 | 40.09 |
| Os12t0108600-00 | Rice | cytosol, peroxisome, plastid | 47.64 | 40.0 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 36.13 | 38.55 |
| AT4G32950.1 | Thale cress | cytosol | 32.72 | 38.34 |
| AT3G16800.2 | Thale cress | nucleus | 34.82 | 37.89 |
| EES07864 | Sorghum | cytosol, nucleus, peroxisome | 46.6 | 37.47 |
| Zm00001d005071_P001 | Maize | cytosol | 46.07 | 37.21 |
| AT5G27930.1 | Thale cress | nucleus | 35.6 | 36.46 |
| KXG22794 | Sorghum | cytosol, nucleus, peroxisome | 47.64 | 36.18 |
| AT5G36250.2 | Thale cress | plastid | 43.72 | 36.15 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 42.41 | 35.06 |
| AT3G02750.3 | Thale cress | plastid | 47.12 | 34.16 |
| AT4G03415.2 | Thale cress | plastid | 41.62 | 33.97 |
| AT1G16220.1 | Thale cress | nucleus | 41.36 | 32.18 |
| AT1G79630.1 | Thale cress | nucleus | 42.41 | 32.14 |
| AT3G06270.1 | Thale cress | cytosol | 22.77 | 25.0 |
| AT2G20050.1 | Thale cress | cytosol | 24.35 | 8.5 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:831695 | ProteinID:AED90378.1 |
| ProteinID:AED90379.1 | ArrayExpress:AT5G01700 | EnsemblPlantsGene:AT5G01700 | RefSeq:AT5G01700 | TAIR:AT5G01700 | RefSeq:AT5G01700-TAIR-G |
| EnsemblPlants:AT5G01700.2 | TAIR:AT5G01700.2 | Unigene:At.33516 | EMBL:BT011618 | EMBL:BT012622 | EMBL:BX831823 |
| ProteinID:CAB82286.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_001031819.1 | RefSeq:NP_195790.4 |
| PFAM:PF00481 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF507 | UniProt:Q6NKS1 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0000196B19 | : | : | : | : | : |
Description
Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
Coordinates
chr5:-:260748..263185
Molecular Weight (calculated)
42006.5 Da
IEP (calculated)
5.498
GRAVY (calculated)
-0.334
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVCCSKGTG IIVEHGADDG NECGDGEAEV RDTNDGAVVR TRGSSKHVSM SIKQGKKGIN QDAMTVWENF GGEEDTIFCG VFDGHGPMGH KISRHVCENL
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.