Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G155800.1 | Wheat | cytosol | 98.36 | 98.36 |
| TraesCS5A01G150700.1 | Wheat | cytosol | 96.49 | 96.49 |
| HORVU5Hr1G047410.12 | Barley | cytosol, peroxisome, plastid | 96.02 | 95.57 |
| Os11t0109000-01 | Rice | cytosol, peroxisome, plastid | 77.99 | 79.29 |
| Os12t0108600-00 | Rice | cytosol, peroxisome, plastid | 76.58 | 71.87 |
| EES07864 | Sorghum | cytosol, nucleus, peroxisome | 72.6 | 65.26 |
| Zm00001d005071_P001 | Maize | cytosol | 70.26 | 63.42 |
| KXG22794 | Sorghum | cytosol, nucleus, peroxisome | 73.07 | 62.03 |
| GSMUA_Achr7P22300_001 | Banana | cytosol, peroxisome, plastid | 52.46 | 53.21 |
| KRH76051 | Soybean | cytoskeleton, cytosol, peroxisome | 34.19 | 50.34 |
| VIT_08s0058g00660.t01 | Wine grape | cytosol | 44.96 | 48.73 |
| Bra009643.1-P | Field mustard | cytosol, peroxisome, plastid | 40.28 | 47.65 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 40.28 | 47.65 |
| KRH65540 | Soybean | cytosol | 22.48 | 46.83 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 40.52 | 45.29 |
| KRH40835 | Soybean | nucleus, peroxisome, plastid | 45.2 | 44.47 |
| KRH00350 | Soybean | cytosol, peroxisome, plastid | 43.79 | 44.1 |
| Solyc10g076320.1.1 | Tomato | nucleus | 43.79 | 42.89 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 35.83 | 42.86 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 33.96 | 42.65 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 38.41 | 42.6 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 33.72 | 42.48 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 33.72 | 42.48 |
| PGSC0003DMT400030965 | Potato | nucleus | 44.26 | 42.47 |
| TraesCS4B01G162100.1 | Wheat | cytosol, mitochondrion, peroxisome | 43.56 | 42.47 |
| KRH65533 | Soybean | cytosol | 20.84 | 42.18 |
| KRH65575 | Soybean | cytosol | 10.77 | 41.82 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 22.01 | 41.41 |
| TraesCS2B01G229000.1 | Wheat | cytosol, peroxisome, plastid | 41.45 | 41.07 |
| Solyc10g085370.1.1 | Tomato | cytosol, nucleus, peroxisome | 42.39 | 39.96 |
| PGSC0003DMT400028836 | Potato | nucleus | 42.15 | 39.82 |
| KRH65545 | Soybean | cytosol, peroxisome, plastid | 20.37 | 39.19 |
| TraesCS7B01G137400.2 | Wheat | plastid | 46.14 | 34.26 |
| TraesCS6B01G229600.1 | Wheat | mitochondrion | 39.58 | 32.63 |
| TraesCS2B01G291800.1 | Wheat | mitochondrion | 38.41 | 31.0 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 24.82 | 30.29 |
| TraesCS2B01G166100.3 | Wheat | cytosol | 21.55 | 19.7 |
| TraesCS6B01G231400.1 | Wheat | plastid | 23.42 | 9.21 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF507 | SMART:SM00332 |
| SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS5B01G149300 | EnsemblPlants:TraesCS5B01G149300.1 | TIGR:cd00143 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:277248401..277250570
Molecular Weight (calculated)
46675.9 Da
IEP (calculated)
5.240
GRAVY (calculated)
-0.397
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICCSREGG GRELEETEGW FPWKHDDFLQ EQLAGAAGVS MHTKQGWKGV NQDAMAACQD FAGHKGQIFC GVFDGHGPLG RDVARHVRDS LPKKLSASLA
101: PRAEDDALSS NSNADMDSFD KSDCTSSSDT SEEHQLLSSW KSLIVKAFED VDEELRQHSG IDCLCSGTTA VTVVRQGDHL IVANLGDSRA VLCARDSKGR
201: PVSVQITTDL KPDLPGEAER ILSCKGRIFA MDDEPDVPRL WLPDQDAPGL AMARAFGDFC LKNHGLICTP EVYYRKLSEK DDFLVLATDG IWDVLSNKEV
301: VKIVSSASDR SKAAKQLVDR AVRAWRRKFP TSMVDDCAAV CLFLKPAAIS SEEDSTTKPP HAPVLSFTGS FRKALGGGEA EEGTAVWRAL EGVARVNSVI
401: RLPRMLSRRW RSASMDENND QESSKVD
101: PRAEDDALSS NSNADMDSFD KSDCTSSSDT SEEHQLLSSW KSLIVKAFED VDEELRQHSG IDCLCSGTTA VTVVRQGDHL IVANLGDSRA VLCARDSKGR
201: PVSVQITTDL KPDLPGEAER ILSCKGRIFA MDDEPDVPRL WLPDQDAPGL AMARAFGDFC LKNHGLICTP EVYYRKLSEK DDFLVLATDG IWDVLSNKEV
301: VKIVSSASDR SKAAKQLVDR AVRAWRRKFP TSMVDDCAAV CLFLKPAAIS SEEDSTTKPP HAPVLSFTGS FRKALGGGEA EEGTAVWRAL EGVARVNSVI
401: RLPRMLSRRW RSASMDENND QESSKVD
001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL
Arabidopsis Description
Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.