Factsheet for Solyc10g085370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028836	Potato	nucleus	94.92	95.13
Solyc10g076320.1.1	Tomato	nucleus	66.45	69.04
CDY40298	Canola	cytosol, peroxisome, plastid	41.5	52.08
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	41.28	51.8
KRH65540	Soybean	cytosol	22.96	50.73
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	32.45	50.69
VIT_08s0058g00660.t01	Wine grape	cytosol	42.16	48.48
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	40.62	48.17
KRH40835	Soybean	nucleus, peroxisome, plastid	45.7	47.7
KRH00350	Soybean	cytosol, peroxisome, plastid	44.15	47.17
KRH65575	Soybean	cytosol	11.04	45.45
KRH65533	Soybean	cytosol	20.75	44.55
Solyc08g065670.2.1	Tomato	peroxisome	30.02	44.44
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	40.4	43.57
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	40.4	43.47
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	36.87	43.38
TraesCS5A01G150700.1	Wheat	cytosol	40.18	42.62
TraesCS5D01G155800.1	Wheat	cytosol	40.18	42.62
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	31.57	42.56
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	40.18	42.42
TraesCS5B01G149300.1	Wheat	cytosol	39.96	42.39
KRH65545	Soybean	cytosol, peroxisome, plastid	20.75	42.34
Solyc04g056560.2.1	Tomato	cytosol	36.42	41.15
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	30.02	40.96
Solyc01g065700.2.1	Tomato	nucleus	32.23	40.44
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	40.62	40.44
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	32.23	39.78
Solyc05g055790.2.1	Tomato	plastid	41.06	39.57
Solyc07g054300.2.1	Tomato	plastid	40.18	38.56
Solyc10g008490.2.1	Tomato	plastid	39.74	38.38
EES07864	Sorghum	cytosol, nucleus, peroxisome	39.29	37.47
Zm00001d005071_P001	Maize	cytosol	38.19	36.58
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	16.34	36.1
KXG22794	Sorghum	cytosol, nucleus, peroxisome	38.85	34.99
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	37.53	33.01
Solyc10g005640.2.1	Tomato	nucleus	38.19	31.12
Solyc01g080400.2.1	Tomato	cytosol	20.09	21.98
Solyc05g018300.2.1	Tomato	cytosol	22.52	9.44

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4D3X1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF199
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc10g085370.1	EnsemblPlants:Solyc10g085370.1.1	UniParc:UPI000276A8B4	SEG:seg

Description

No Description!

Coordinates

chr10:-:64571477..64574735

Molecular Weight (calculated)

51850.1 Da

IEP (calculated)

6.204

GRAVY (calculated)

-0.654

Length

453 amino acids

Sequence
(BLAST)

001: MGACCSCRRV LHFDHQGNYR HHNYINGDDK EDNNIIVEDD HHGVVGKGDF GANIRLHGYS KFVSMYSQQG KKGINQDAMT VWENFGGEKG AFFCGVFDGH
101: GPLGHKVARY VRDMLPSKIS ISLKECDINK NKIIENIEND EEFDQNFPLF DAWKSAYLKS FKEMDEQLGS EPSIESYSSG TTAVTLFKQR EHLFIGNLGD
201: SRAIICTRDE KNQLVSKQLT VDLKPHLPNE YERIKSCKGR VMAMEQEPNV YRVWMPDEDC PGLAMARAFG DFCLKDYGLI SVPEVYYRKL TENDEFVVLA
301: TDGIWDVLTN DEVIRIVSTT RKRSMAAKTL VECAVRAWKY KYPRAKIDDC GVVCLFFKRQ KPLLTKSMSE VTQLSFNYAE LANNQNYPDN TKTDDGLDTL
401: LNYQVKEGDD QETDRGVKDG SDNDIKNSSI DHLHYRGQRR KSAMKFVYPE DRQ

Best Arabidopsis Sequence Match ( AT5G01700.2 )
(BLAST)

001: MGVCCSKGTG IIVEHGADDG NECGDGEAEV RDTNDGAVVR TRGSSKHVSM SIKQGKKGIN QDAMTVWENF GGEEDTIFCG VFDGHGPMGH KISRHVCENL
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS

Arabidopsis Description

Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.