Factsheet for Solyc08g065540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005637	Potato	cytosol	50.6	86.15
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	83.13	82.14
Solyc08g065670.2.1	Tomato	peroxisome	73.8	80.07
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	48.49	78.54
VIT_04s0008g00740.t01	Wine grape	cytosol	57.83	55.01
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	53.01	51.31
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	47.89	50.64
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	50.3	50.45
CDX80553	Canola	cytosol	50.9	50.0
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	51.51	49.71
Bra009875.1-P	Field mustard	cytosol	50.3	49.41
CDX88210	Canola	cytosol	50.3	49.41
GSMUA_Achr7P09260_001	Banana	nucleus	48.19	48.05
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	12.05	47.62
Bra034542.1-P	Field mustard	cytosol	46.69	47.55
CDY28276	Canola	cytosol	46.39	47.24
KRH15511	Soybean	cytosol, nucleus, peroxisome	33.73	47.06
CDX72381	Canola	cytosol	46.08	46.93
AT4G32950.1	Thale cress	cytosol	46.08	46.93
CDY45023	Canola	cytosol	46.08	46.93
CDY13509	Canola	cytosol	44.88	45.71
Bra037033.1-P	Field mustard	cytosol	44.88	45.71
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	47.59	44.63
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	48.19	44.57
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	47.89	44.54
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	48.19	44.32
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	47.59	41.91
EES04776	Sorghum	cytosol, peroxisome, plastid	47.59	41.47
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	47.89	40.87
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	40.36	36.51
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	47.89	35.02
Solyc01g065700.2.1	Tomato	nucleus	36.75	33.8
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	15.96	33.33
Solyc04g056560.2.1	Tomato	cytosol	39.16	32.42
Solyc05g055790.2.1	Tomato	plastid	43.67	30.85
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	40.96	30.02
Solyc10g076320.1.1	Tomato	nucleus	39.16	29.82
Solyc07g054300.2.1	Tomato	plastid	40.36	28.39
Solyc10g008490.2.1	Tomato	plastid	39.46	27.93
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	41.57	26.8
Solyc10g005640.2.1	Tomato	nucleus	41.87	25.0
Solyc01g080400.2.1	Tomato	cytosol	28.61	22.95
Solyc05g018300.2.1	Tomato	cytosol	28.01	8.61

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CLD4	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc08g065540.2	EnsemblPlants:Solyc08g065540.2.1	UniParc:UPI000276B6D0	SEG:seg

Description

No Description!

Coordinates

chr8:-:53677608..53679291

Molecular Weight (calculated)

36784.8 Da

IEP (calculated)

5.681

GRAVY (calculated)

-0.185

Length

332 amino acids

Sequence
(BLAST)

001: MGICISSESF EIQPVGFGNE NVVHYDDNNI NENQCVIGSV FSQQGNKGIN QDSAILYQRY GVENGVFGGV FDGHGENGHI VSKFVMTKLP SLLLKLTFSL
101: PKIFSVKQNV MRRNFNKWKK VCWSSFMVMD KDIKSLENLD CSFSGTTAVV AIRQDDDLVI ANLGDSRAVL GRKTEEGVIE AVQLTTDLKP SLTSEVERIR
201: RCGGRVFARK EEPHIQRVYL PNEDVPGLAM TRSYGDLMLK YFGIISEPDV SYHHITPNDQ FVVLATDGVW DVLSNDQVVS IVCATNNAAA AAETVVQASL
301: DAWKQRFPNS KRDDSTVICL YLQQGASLKN GT

Best Arabidopsis Sequence Match ( AT5G26010.1 )
(BLAST)

001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S

Arabidopsis Description

Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.