Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88210 | Canola | cytosol | 97.04 | 97.04 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 81.95 | 83.69 |
| PGSC0003DMT400005637 | Potato | cytosol | 34.62 | 60.0 |
| Solyc08g065670.2.1 | Tomato | peroxisome | 48.52 | 53.59 |
| Zm00001d009234_P001 | Maize | cytosol, peroxisome, plastid | 13.31 | 53.57 |
| Solyc08g065500.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 52.07 | 52.38 |
| VIT_04s0008g00740.t01 | Wine grape | cytosol | 53.55 | 51.86 |
| Solyc08g065540.2.1 | Tomato | cytosol, nucleus, peroxisome | 50.0 | 50.9 |
| KRH52174 | Soybean | cytoskeleton, cytosol, peroxisome | 51.48 | 50.73 |
| CDY45023 | Canola | cytosol | 48.52 | 50.31 |
| CDY28276 | Canola | cytosol | 48.52 | 50.31 |
| CDX72381 | Canola | cytosol | 47.93 | 49.69 |
| GSMUA_Achr2P15710_001 | Banana | cytosol, peroxisome, plastid | 46.15 | 49.68 |
| CDY13509 | Canola | cytosol | 47.04 | 48.77 |
| GSMUA_Achr7P09260_001 | Banana | nucleus | 47.63 | 48.35 |
| KRH05503 | Soybean | cytoskeleton, cytosol, peroxisome | 49.11 | 48.26 |
| CDY72270 | Canola | cytosol | 28.7 | 45.97 |
| KRH15511 | Soybean | cytosol, nucleus, peroxisome | 31.36 | 44.54 |
| HORVU6Hr1G039940.1 | Barley | nucleus, peroxisome, plastid | 46.45 | 44.35 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 46.45 | 43.98 |
| TraesCS6D01G178400.1 | Wheat | cytosol, nucleus, peroxisome | 46.45 | 43.73 |
| TraesCS6A01G187700.1 | Wheat | cytosol, nucleus, peroxisome | 46.45 | 43.49 |
| Solyc08g065680.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 25.15 | 41.46 |
| Zm00001d016332_P001 | Maize | cytosol, nucleus, peroxisome | 46.15 | 41.38 |
| EES04776 | Sorghum | cytosol, peroxisome, plastid | 46.15 | 40.94 |
| Os02t0224100-01 | Rice | cytosol, peroxisome, plastid | 44.67 | 38.82 |
| Zm00001d009620_P001 | Maize | cytosol, peroxisome, plastid | 18.05 | 38.36 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 40.24 | 37.67 |
| CDX91383 | Canola | cytosol | 35.5 | 37.5 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 37.87 | 36.78 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 33.73 | 36.66 |
| CDY69821 | Canola | plastid | 42.31 | 36.39 |
| CDY05554 | Canola | nucleus | 38.46 | 35.33 |
| CDY50503 | Canola | nucleus | 36.39 | 35.04 |
| CDY67911 | Canola | nucleus | 36.39 | 35.04 |
| CDY19742 | Canola | nucleus | 38.46 | 34.85 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 38.46 | 34.85 |
| CDX92097 | Canola | nucleus | 36.09 | 34.76 |
| Zm00001d053566_P002 | Maize | nucleus, peroxisome, plastid | 46.45 | 34.58 |
| CDX95903 | Canola | nucleus | 35.8 | 34.47 |
| CDY25013 | Canola | nucleus | 38.17 | 34.4 |
| CDY70364 | Canola | cytosol, peroxisome | 36.69 | 34.25 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 38.76 | 34.03 |
| CDY00978 | Canola | cytosol | 35.21 | 33.9 |
| CDY56581 | Canola | cytosol | 33.73 | 33.53 |
| CDX89881 | Canola | plastid | 42.01 | 33.41 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 41.72 | 33.25 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 41.42 | 33.1 |
| CDY37649 | Canola | mitochondrion, plastid | 41.12 | 32.33 |
| CDY63003 | Canola | mitochondrion, plastid | 41.12 | 31.74 |
| CDX97493 | Canola | cytosol | 30.47 | 31.02 |
| CDY21964 | Canola | plastid | 40.24 | 30.98 |
| CDY48559 | Canola | plastid | 40.24 | 30.91 |
| CDY53741 | Canola | plastid | 42.01 | 30.41 |
| CDY53743 | Canola | plastid | 41.72 | 30.13 |
| CDX92009 | Canola | plastid | 41.72 | 29.81 |
| CDX88554 | Canola | nucleus | 41.12 | 29.08 |
| CDX74239 | Canola | plastid | 41.42 | 28.81 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 39.94 | 28.12 |
| CDX87369 | Canola | nucleus | 40.83 | 28.05 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 39.65 | 27.8 |
| CDX74112 | Canola | plastid | 28.99 | 27.68 |
| CDY08060 | Canola | plastid | 28.7 | 27.4 |
| CDY34568 | Canola | cytosol | 11.24 | 27.14 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 41.12 | 26.08 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 40.83 | 26.04 |
| CDY18847 | Canola | cytosol | 24.26 | 25.15 |
| CDX82702 | Canola | nucleus | 21.3 | 16.0 |
| CDY05716 | Canola | cytosol | 27.22 | 8.54 |
| CDY35922 | Canola | cytosol | 27.22 | 8.51 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078CZP4 | EnsemblPlants:CDX80553 |
| ProteinID:CDX80553 | ProteinID:CDX80553.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00133665001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF315 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EB7532 | SEG:seg | : | : | : | : |
Description
BnaC07g28910D
Coordinates
chrLK031821:-:1264954..1267495
Molecular Weight (calculated)
37373.4 Da
IEP (calculated)
5.040
GRAVY (calculated)
-0.274
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHCFSLPSS SSEIHEENEH GDGNAVVCYG DEFGLDHYRP VHRPGSVCSI QGTKAINQDN AILYLGYGTE EAELCGVFDG HGKNGHMVSK MVRNRLPSLV
101: LTLKKELNEE PHACEEDEDL KWEKACFNAF RLIDRELMLQ VFNCSFSGST AVVAITQGDD LMIANLGDSR AVLGTMTEDG EICAVQLTSD LTPDVPSEAE
201: RIRACRGRVH AMKVEPSSQR VWLPNQDIPG LAMSRAFGDF RLKDYGVIAV PEVSHHRITS KDRFLVLASD GVWDMLSNDE VVSLIWNSGK TQDAAAKLVA
301: EAAEATWKKK LKSKKIDDIT VICLFLHNKE QPSCTMDM
101: LTLKKELNEE PHACEEDEDL KWEKACFNAF RLIDRELMLQ VFNCSFSGST AVVAITQGDD LMIANLGDSR AVLGTMTEDG EICAVQLTSD LTPDVPSEAE
201: RIRACRGRVH AMKVEPSSQR VWLPNQDIPG LAMSRAFGDF RLKDYGVIAV PEVSHHRITS KDRFLVLASD GVWDMLSNDE VVSLIWNSGK TQDAAAKLVA
301: EAAEATWKKK LKSKKIDDIT VICLFLHNKE QPSCTMDM
001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
Arabidopsis Description
Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.