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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34568 Canola cytosol 39.55 87.86
CDX91383 Canola cytosol 86.5 84.06
CDY72270 Canola cytosol 54.98 81.04
CDY56581 Canola cytosol 84.57 77.35
CDY00978 Canola cytosol 86.82 76.92
CDY70364 Canola cytosol, peroxisome 88.42 75.97
CDX97493 Canola cytosol 79.1 74.1
CDY37649 Canola mitochondrion, plastid 90.03 65.12
CDY63003 Canola mitochondrion, plastid 90.68 64.38
AT5G36250.2 Thale cress plastid 86.5 58.23
KRH45221 Soybean cytosol, mitochondrion, peroxisome 27.01 49.12
KRH36356 Soybean cytosol 30.55 45.67
KRG93121 Soybean plastid 48.23 41.1
CDY53743 Canola plastid 60.45 40.17
CDY53741 Canola plastid 60.13 40.04
CDY40298 Canola cytosol, peroxisome, plastid 45.98 39.61
CDX92009 Canola plastid 59.49 39.11
KRH01535 Soybean cytosol 56.91 38.9
CDY69821 Canola plastid 48.87 38.68
CDX74239 Canola plastid 59.49 38.07
CDY67911 Canola nucleus 41.8 37.04
CDY50503 Canola nucleus 41.8 37.04
CDY51537 Canola cytosol, peroxisome, plastid 62.38 36.4
CDY28706 Canola cytosol, peroxisome, plastid 61.74 36.23
CDX95903 Canola nucleus 40.19 35.61
CDY33350 Canola cytosol, nucleus, plastid 54.66 35.42
CDY35072 Canola cytosol, peroxisome, plastid 54.66 35.27
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 43.09 34.81
CDX92097 Canola nucleus 39.23 34.76
CDX88554 Canola nucleus 53.38 34.73
CDY45023 Canola cytosol 36.33 34.66
CDX72381 Canola cytosol 36.33 34.66
CDY13509 Canola cytosol 36.33 34.66
CDY51389 Canola cytosol, peroxisome, plastid 46.95 34.52
CDY18810 Canola cytosol, nucleus, peroxisome 38.59 34.48
CDY28276 Canola cytosol 36.01 34.36
CDX89881 Canola plastid 46.95 34.35
CDX87369 Canola nucleus 54.02 34.15
CDY15466 Canola cytosol, peroxisome, plastid 46.3 33.96
CDY21964 Canola plastid 47.91 33.94
CDY48559 Canola plastid 47.91 33.86
CDX80553 Canola cytosol 36.66 33.73
CDX88210 Canola cytosol 36.66 33.73
CDY05554 Canola nucleus 39.23 33.15
CDY53338 Canola cytosol, mitochondrion, nucleus 39.23 32.71
CDY19742 Canola nucleus 38.91 32.44
CDY25013 Canola nucleus 38.91 32.27
KRH45222 Soybean nucleus 18.97 25.43
CDY08060 Canola plastid 22.51 19.77
CDX74112 Canola plastid 22.19 19.49
CDY18847 Canola cytosol 19.94 19.02
CDX82702 Canola nucleus 19.94 13.78
CDY05716 Canola cytosol 25.4 7.34
CDY35922 Canola cytosol 25.4 7.31
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078I7S9UniProt:A0A078I7S9
EnsemblPlants:CDY46975ProteinID:CDY46975ProteinID:CDY46975.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00086461001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF510SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EE6129SEG:seg:::
Description
BnaC09g14290DBnaC09g14290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7S9]
Coordinates
chrLK032693:+:18924..22811
Molecular Weight (calculated)
34828.2 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.108
Length
311 amino acids
Sequence
(BLAST)
001: MVGIKSILII SGKKGPNQDA MIVWENFGSM EDTVFCGVFN GHGPYGHVIA KRVRDLLPLK LGSHLESYLS CEEVFKEISL NTADRMTSDG LVQISANGES
101: GVYNKDQDMV QMLLTSIVKA YRFMDKELKM QVDVDCFCSG TTTVTMVKQG QHLVVGNIGD SRAVLDTRNK ENKLVPFQLT EDLKPDVQAE AARIKRCRGR
201: IFALWDEPGV ARLWLPNHNS PGLAMARAFG EFCLKDFGLI YVPDVSYRRL TEKDEFVVLA TDWIWDVLTN EEVVEIVAKA PTRCTAGRAL VEAAVRNWRW
301: KFPTSKSMAA L
Best Arabidopsis Sequence Match ( AT5G36250.3 )
(BLAST)
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG VRNIQAQCQN KCGLVSSFS
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.