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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72270 Canola cytosol 57.27 95.26
CDX91383 Canola cytosol 85.47 93.75
CDY34568 Canola cytosol 35.33 88.57
CDY46975 Canola cytosol, mitochondrion, peroxisome 76.92 86.82
CDY70364 Canola cytosol, peroxisome 89.46 86.74
CDX97493 Canola cytosol 80.34 84.94
CDY56581 Canola cytosol 76.64 79.12
CDY37649 Canola mitochondrion, plastid 91.45 74.65
CDY63003 Canola mitochondrion, plastid 92.31 73.97
AT5G36250.2 Thale cress plastid 86.04 65.37
Bra021332.1-P Field mustard endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 25.07 60.27
KRH45221 Soybean cytosol, mitochondrion, peroxisome 26.78 54.97
KRH36356 Soybean cytosol 26.78 45.19
CDY53743 Canola plastid 56.41 42.31
CDY53741 Canola plastid 56.13 42.18
KRG93121 Soybean plastid 42.73 41.1
CDX92009 Canola plastid 55.27 41.01
CDY69821 Canola plastid 45.01 40.2
CDX74239 Canola plastid 54.99 39.71
CDY40298 Canola cytosol, peroxisome, plastid 40.74 39.61
KRH01535 Soybean cytosol 51.0 39.34
CDY51537 Canola cytosol, peroxisome, plastid 56.98 37.52
CDY28706 Canola cytosol, peroxisome, plastid 56.41 37.36
CDY67911 Canola nucleus 36.75 36.75
CDY50503 Canola nucleus 36.75 36.75
CDY33350 Canola cytosol, nucleus, plastid 50.14 36.67
CDY35072 Canola cytosol, peroxisome, plastid 50.14 36.51
CDX89881 Canola plastid 44.16 36.47
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 39.89 36.36
CDY15466 Canola cytosol, peroxisome, plastid 43.87 36.32
CDX88554 Canola nucleus 49.29 36.19
CDY51389 Canola cytosol, peroxisome, plastid 43.59 36.17
CDY21964 Canola plastid 45.01 35.99
CDY48559 Canola plastid 45.01 35.91
CDX95903 Canola nucleus 35.61 35.61
CDX87369 Canola nucleus 49.57 35.37
CDX80553 Canola cytosol 33.9 35.21
CDX88210 Canola cytosol 33.62 34.91
CDX92097 Canola nucleus 34.76 34.76
CDY45023 Canola cytosol 32.19 34.66
CDY28276 Canola cytosol 32.19 34.66
CDY05554 Canola nucleus 36.18 34.51
CDY18810 Canola cytosol, nucleus, peroxisome 34.19 34.48
CDY13509 Canola cytosol 31.62 34.05
CDX72381 Canola cytosol 31.62 34.05
CDY53338 Canola cytosol, mitochondrion, nucleus 35.9 33.78
CDY25013 Canola nucleus 35.9 33.6
CDY19742 Canola nucleus 35.61 33.51
KRH45222 Soybean nucleus 13.96 21.12
CDY08060 Canola plastid 19.37 19.21
CDX74112 Canola plastid 19.09 18.93
CDY18847 Canola cytosol 16.81 18.1
CDX82702 Canola nucleus 17.38 13.56
CDY35922 Canola cytosol 24.79 8.05
CDY05716 Canola cytosol 24.5 7.99
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078ENC1EnsemblPlants:CDY00978
ProteinID:CDY00978ProteinID:CDY00978.1GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00110993001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2CInterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF510SMART:SM00332SUPFAM:SSF81606
UniParc:UPI0004EE3C84SEG:seg::::
Description
BnaC05g42220D
Coordinates
chrLK031923:-:398961..400676
Molecular Weight (calculated)
39017.6 Da
IEP (calculated)
5.620
GRAVY (calculated)
-0.166
Length
351 amino acids
Sequence
(BLAST)
001: MIVLENFGSM EDTVFCGVFD GHGPYGHIIA KRVRDLLPLK LGSHLESYLS CEEVLKEISL NTADRMTSGS LVQISANGES RVYNKDQDMV QMLLISIVKA
101: YRFMDKELKM QVDVDCFCSG TTAVTMVKQG QHLVVGNIGD SRAVLGTRNK ENKLVHFQLT EDLKPDVPAE AARIKRCRGR IFALRDEPGV AHLWLPNHNS
201: HVLAMARAFG DFCLKDFGLI YVPDVSYRRL TEKDEFVVLA TDWIWDVLTN EEVVEIVAKA PTRCTAGRAL VEATVRNWRW KFPTSKVDDC AVVCLFLDSK
301: PDKLSIASFS VDKHISNGLT EPDTTSTSTP GSGTESPELN GVEESTESTH S
Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.