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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020569.1-P Field mustard nucleus 98.67 98.67
CDY05554 Canola nucleus 96.8 98.64
CDY19742 Canola nucleus 91.2 91.69
CDY53338 Canola cytosol, mitochondrion, nucleus 91.2 91.69
AT5G27930.1 Thale cress nucleus 88.27 88.74
CDY18810 Canola cytosol, nucleus, peroxisome 75.47 81.32
KRG96758 Soybean cytosol, mitochondrion, peroxisome 69.6 70.73
KRH68473 Soybean cytosol, mitochondrion, peroxisome 69.07 69.81
VIT_14s0060g02070.t01 Wine grape mitochondrion 67.73 69.4
KRH33864 Soybean nucleus 66.13 67.39
KRG92929 Soybean nucleus 65.33 66.76
GSMUA_Achr11P... Banana mitochondrion 60.0 65.79
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 61.07 65.43
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 64.0 65.4
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 63.73 65.12
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 54.93 60.59
TraesCS1B01G242300.1 Wheat mitochondrion 54.4 60.18
TraesCS1A01G228100.1 Wheat mitochondrion 54.13 60.06
TraesCS1B01G242200.1 Wheat mitochondrion 54.13 59.88
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 55.47 58.92
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 54.93 58.52
CDY67911 Canola nucleus 53.87 57.55
CDY50503 Canola nucleus 53.87 57.55
Os05t0358500-01 Rice mitochondrion 54.13 57.51
Zm00001d037949_P001 Maize mitochondrion 54.13 57.51
TraesCS1D01G229700.1 Wheat mitochondrion 54.4 55.43
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 54.13 55.16
TraesCS1D01G229600.2 Wheat mitochondrion 53.87 55.04
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 33.07 54.63
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 54.13 54.42
HORVU1Hr1G059130.3 Barley mitochondrion 54.67 54.38
CDX95903 Canola nucleus 50.4 53.85
CDX92097 Canola nucleus 49.87 53.28
CDY72270 Canola cytosol 25.87 45.97
TraesCS1A01G228200.1 Wheat mitochondrion 46.67 45.45
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 29.87 42.11
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 38.13 40.86
CDX91383 Canola cytosol 33.6 39.38
CDY40298 Canola cytosol, peroxisome, plastid 37.6 39.06
CDY46975 Canola cytosol, mitochondrion, peroxisome 32.27 38.91
CDX88210 Canola cytosol 34.67 38.46
CDX80553 Canola cytosol 34.4 38.17
CDX72381 Canola cytosol 33.07 38.04
CDY70364 Canola cytosol, peroxisome 36.53 37.85
CDY45023 Canola cytosol 32.8 37.73
CDY13509 Canola cytosol 32.8 37.73
CDY28276 Canola cytosol 32.53 37.42
CDY69821 Canola plastid 38.4 36.64
CDY00978 Canola cytosol 33.6 35.9
CDY56581 Canola cytosol 31.73 35.0
CDY37649 Canola mitochondrion, plastid 40.0 34.88
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 35.47 34.55
CDX89881 Canola plastid 38.93 34.35
CDY63003 Canola mitochondrion, plastid 40.0 34.25
CDY15466 Canola cytosol, peroxisome, plastid 38.67 34.2
CDX92009 Canola plastid 42.93 34.04
CDY21964 Canola plastid 39.47 33.71
CDY53741 Canola plastid 41.87 33.62
CDY51389 Canola cytosol, peroxisome, plastid 37.87 33.57
CDY53743 Canola plastid 41.87 33.55
CDY48559 Canola plastid 38.93 33.18
CDX74239 Canola plastid 42.4 32.72
CDX97493 Canola cytosol 28.53 32.23
CDY35072 Canola cytosol, peroxisome, plastid 40.0 31.12
CDY33350 Canola cytosol, nucleus, plastid 39.73 31.04
CDX88554 Canola nucleus 39.47 30.96
CDX87369 Canola nucleus 40.27 30.69
CDY28706 Canola cytosol, peroxisome, plastid 42.93 30.38
CDY51537 Canola cytosol, peroxisome, plastid 42.4 29.83
CDY34568 Canola cytosol 10.93 29.29
CDY08060 Canola plastid 25.07 26.55
CDX74112 Canola plastid 24.8 26.27
CDY18847 Canola cytosol 21.07 24.23
CDX82702 Canola nucleus 15.47 12.89
CDY05716 Canola cytosol 25.07 8.73
CDY35922 Canola cytosol 24.8 8.6
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078GKA7UniProt:A0A078GKA7
EnsemblPlants:CDY25013ProteinID:CDY25013ProteinID:CDY25013.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00028834001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF198SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EF2766SEG:seg:::
Description
BnaC02g39950DBnaC02g39950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKA7]
Coordinates
chrLK032167:+:298538..302386
Molecular Weight (calculated)
41655.6 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.345
Length
375 amino acids
Sequence
(BLAST)
001: MGHFSSMFSG LARSFSIKKV KNNNGTCDAK EAADEMVKDA KKKEMILKSC GYVYAEGSNN SASVFSKRGE KGVNQDCAIV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKHV RNSMPSSLLC NWQKTLAQTA LLEPELDLEG SNKKFSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT AITIVRQGDV IYVSNVGDSR
201: AVLATSSDEG SMVAIQLTLD FKPNLPQEKE RIIGCNGRVF CMKDEPGVHR VWQPDTEAPG LAMSRAFGDY CIKEYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVITNQE AIEIVSSTAE RPKAAKRLVE QAVRAWKKKR RGIAMDDMSV VCLFLHSSSS SPSLSQHVQH ATTFK
Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)
001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
Arabidopsis Description
PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.