Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G05640.1 | KRH23291 | AT4G08520.1 | 21798944 |
| AT3G05640.1 | KRH44115 | AT4G08520.1 | 21798944 |
| AT3G05640.1 | KRH47095 | AT4G08520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96758 | Soybean | cytosol, mitochondrion, peroxisome | 96.23 | 96.75 |
| KRG92929 | Soybean | nucleus | 81.13 | 82.02 |
| KRH33864 | Soybean | nucleus | 81.13 | 81.79 |
| VIT_14s0060g02070.t01 | Wine grape | mitochondrion | 77.9 | 78.96 |
| Bra040530.1-P | Field mustard | cytosol, nucleus, peroxisome | 70.62 | 75.29 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 70.62 | 75.29 |
| Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 73.05 | 73.84 |
| PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 72.78 | 73.57 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 70.35 | 72.91 |
| GSMUA_Achr11P... | Banana | mitochondrion | 66.85 | 72.51 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 66.85 | 70.86 |
| AT5G27930.1 | Thale cress | nucleus | 70.62 | 70.24 |
| CDY05554 | Canola | nucleus | 69.54 | 70.11 |
| Bra020569.1-P | Field mustard | nucleus | 70.62 | 69.87 |
| Bra036606.1-P | Field mustard | nucleus | 70.08 | 69.71 |
| CDY19742 | Canola | nucleus | 69.81 | 69.44 |
| CDY25013 | Canola | nucleus | 69.81 | 69.07 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 69.0 | 68.63 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 59.3 | 64.71 |
| KRH50799 | Soybean | cytosol | 63.61 | 64.31 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 60.11 | 63.35 |
| TraesCS1A01G228100.1 | Wheat | mitochondrion | 57.68 | 63.31 |
| KRH02293 | Soybean | cytosol | 63.88 | 63.03 |
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 59.84 | 62.89 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 57.41 | 62.83 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 57.41 | 62.83 |
| Zm00001d037949_P001 | Maize | mitochondrion | 58.76 | 61.76 |
| Os05t0358500-01 | Rice | mitochondrion | 57.14 | 60.06 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 36.66 | 59.91 |
| TraesCS1D01G230000.2 | Wheat | cytosol, peroxisome, plastid | 58.22 | 58.7 |
| HORVU1Hr1G059130.3 | Barley | mitochondrion | 59.3 | 58.36 |
| TraesCS1D01G229700.1 | Wheat | mitochondrion | 57.41 | 57.88 |
| TraesCS1D01G229600.2 | Wheat | mitochondrion | 57.14 | 57.77 |
| TraesCS1A01G228000.1 | Wheat | mitochondrion, peroxisome, plastid | 57.41 | 57.1 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 49.6 | 47.79 |
| KRH36356 | Soybean | cytosol | 25.61 | 45.67 |
| HORVU1Hr1G059140.2 | Barley | mitochondrion, plastid | 32.61 | 45.49 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 42.86 | 45.43 |
| KRH45221 | Soybean | cytosol, mitochondrion, peroxisome | 20.49 | 44.44 |
| KRH65540 | Soybean | cytosol | 24.53 | 44.39 |
| KRG93121 | Soybean | plastid | 43.13 | 43.84 |
| KRH76051 | Soybean | cytoskeleton, cytosol, peroxisome | 33.15 | 42.41 |
| KRH52174 | Soybean | cytoskeleton, cytosol, peroxisome | 39.08 | 42.27 |
| KRH45219 | Soybean | vacuole | 10.78 | 42.11 |
| KRH05503 | Soybean | cytoskeleton, cytosol, peroxisome | 37.47 | 40.41 |
| KRH65533 | Soybean | cytosol | 22.37 | 39.34 |
| KRH65575 | Soybean | cytosol | 10.78 | 36.36 |
| KRH00350 | Soybean | cytosol, peroxisome, plastid | 41.24 | 36.08 |
| KRH01535 | Soybean | cytosol | 44.2 | 36.04 |
| KRH65545 | Soybean | cytosol, peroxisome, plastid | 21.56 | 36.04 |
| KRH00931 | Soybean | plastid | 46.9 | 35.73 |
| KRH40292 | Soybean | plastid | 46.9 | 35.58 |
| KRH40835 | Soybean | nucleus, peroxisome, plastid | 41.24 | 35.25 |
| KRH15511 | Soybean | cytosol, nucleus, peroxisome | 22.37 | 34.87 |
| KRH26917 | Soybean | cytosol, plastid | 40.16 | 31.43 |
| KRH56012 | Soybean | nucleus | 39.62 | 31.21 |
| KRH25524 | Soybean | nucleus | 39.35 | 31.0 |
| KRH22416 | Soybean | nucleus, plastid | 39.62 | 30.95 |
| KRH45222 | Soybean | nucleus | 15.36 | 24.57 |
| KRH11326 | Soybean | cytosol, mitochondrion, nucleus, plastid | 26.15 | 22.51 |
| KRH20951 | Soybean | plastid | 25.88 | 22.27 |
| KRH02158 | Soybean | cytosol | 24.53 | 21.88 |
| KRH50972 | Soybean | cytosol | 24.8 | 21.75 |
| KRH39350 | Soybean | cytosol | 25.88 | 8.93 |
| KRH76332 | Soybean | cytosol | 25.34 | 8.58 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100801309 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | UniProt:A0A0R0KTE8 |
| EMBL:ACUP02002117 | EnsemblPlantsGene:GLYMA_03G233500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR001932 | InterPro:IPR036457 | ProteinID:KRH68471.1 | ProteinID:KRH68472.1 | EnsemblPlants:KRH68473 | ProteinID:KRH68473 |
| ProteinID:KRH68473.1 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF514 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0001B63B07 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:43430281..43434580
Molecular Weight (calculated)
41100.0 Da
IEP (calculated)
7.084
GRAVY (calculated)
-0.246
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHFSSMFNG LARSFSMKKG RRNGKCGGRE AAEAMAKEAK KNDMMLCSSG IVHVDGSNNF ASVFSKRGQK GVNQDCCMVW EEFGCQEDMI FCGIFDGHGP
101: WGHFVAKRIR ESMPPSLLCN WQETLAQTSI DHPAIDVEEE KSKHYRFNIW KHSYLKTCAA IDQELEQYRK IDSFYSGTTA LSIVRQGELI VIANVGDSRA
201: VLATTSDDGS LVPVQLTIDF KPNLPQEAER IIQCQGRVFC LEDEPGVHRV WLPDEESPGL AMSRAFGDYC IKGHGLISVP EVTHRNITSR DQFVVLATDG
301: VWDVISNKEA VDIVSSAADK AKAAKRLVEC AVHAWKRKRR GIAVDDISAI CLFFHSSSLS TGQVSQVATL K
101: WGHFVAKRIR ESMPPSLLCN WQETLAQTSI DHPAIDVEEE KSKHYRFNIW KHSYLKTCAA IDQELEQYRK IDSFYSGTTA LSIVRQGELI VIANVGDSRA
201: VLATTSDDGS LVPVQLTIDF KPNLPQEAER IIQCQGRVFC LEDEPGVHRV WLPDEESPGL AMSRAFGDYC IKGHGLISVP EVTHRNITSR DQFVVLATDG
301: VWDVISNKEA VDIVSSAADK AKAAKRLVEC AVHAWKRKRR GIAVDDISAI CLFFHSSSLS TGQVSQVATL K
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Arabidopsis Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.