CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX75151
CDY36196
CDY65427

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05640.1	CDX75151	AT4G08520.1	21798944
AT3G05640.1	CDY36196	AT4G08520.1	21798944
AT3G05640.1	CDY65427	AT4G25920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	100.0	100.0
AT3G05640.1	Thale cress	cytosol, mitochondrion, peroxisome	87.07	84.64
CDY19742	Canola	nucleus	81.32	75.87
CDY05554	Canola	nucleus	80.17	75.82
CDY25013	Canola	nucleus	81.32	75.47
CDY53338	Canola	cytosol, mitochondrion, nucleus	80.75	75.34
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	75.86	71.54
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	75.29	70.62
VIT_14s0060g02070.t01	Wine grape	mitochondrion	72.41	68.85
KRH33864	Soybean	nucleus	71.84	67.93
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	71.55	67.85
KRG92929	Soybean	nucleus	71.55	67.85
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	70.98	67.3
GSMUA_Achr11P...	Banana	mitochondrion	64.37	65.5
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	65.23	64.86
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	59.77	61.18
TraesCS1B01G242200.1	Wheat	mitochondrion	58.62	60.18
TraesCS1B01G242300.1	Wheat	mitochondrion	58.62	60.18
TraesCS1A01G228100.1	Wheat	mitochondrion	58.05	59.76
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	60.06	59.21
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	59.48	58.81
Os05t0358500-01	Rice	mitochondrion	58.62	57.79
Zm00001d037949_P001	Maize	mitochondrion	58.62	57.79
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	58.91	55.71
CDY67911	Canola	nucleus	56.03	55.56
CDY50503	Canola	nucleus	56.03	55.56
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	35.92	55.07
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	58.62	54.69
TraesCS1D01G229700.1	Wheat	mitochondrion	57.76	54.62
TraesCS1D01G229600.2	Wheat	mitochondrion	57.47	54.5
HORVU1Hr1G059130.3	Barley	mitochondrion	58.33	53.85
CDX95903	Canola	nucleus	53.74	53.28
CDX92097	Canola	nucleus	53.45	52.99
TraesCS1A01G228200.1	Wheat	mitochondrion	50.29	45.45
CDY72270	Canola	cytosol	27.01	44.55
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	42.24	42.0
CDX72381	Canola	cytosol	38.51	41.1
CDY13509	Canola	cytosol	38.22	40.8
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	31.03	40.6
CDY45023	Canola	cytosol	37.93	40.49
CDY28276	Canola	cytosol	37.64	40.18
CDY40298	Canola	cytosol, peroxisome, plastid	40.23	38.78
CDY46975	Canola	cytosol, mitochondrion, peroxisome	34.48	38.59
CDX80553	Canola	cytosol	36.78	37.87
CDX91383	Canola	cytosol	34.77	37.81
CDX88210	Canola	cytosol	36.49	37.57
CDY69821	Canola	plastid	40.8	36.13
CDY70364	Canola	cytosol, peroxisome	37.36	35.91
CDY56581	Canola	cytosol	33.91	34.71
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	38.22	34.55
CDY53743	Canola	plastid	46.26	34.4
CDY53741	Canola	plastid	45.98	34.26
CDY00978	Canola	cytosol	34.48	34.19
CDY37649	Canola	mitochondrion, plastid	41.67	33.72
CDY51389	Canola	cytosol, peroxisome, plastid	40.8	33.57
CDX92009	Canola	plastid	45.11	33.19
CDX89881	Canola	plastid	40.52	33.18
CDY63003	Canola	mitochondrion, plastid	41.67	33.1
CDY15466	Canola	cytosol, peroxisome, plastid	40.23	33.02
CDX74239	Canola	plastid	44.83	32.1
CDX97493	Canola	cytosol	30.17	31.63
CDX88554	Canola	nucleus	43.39	31.59
CDY33350	Canola	cytosol, nucleus, plastid	43.39	31.46
CDY21964	Canola	plastid	39.66	31.44
CDY35072	Canola	cytosol, peroxisome, plastid	43.39	31.33
CDY48559	Canola	plastid	39.08	30.91
CDX87369	Canola	nucleus	43.39	30.69
CDY28706	Canola	cytosol, peroxisome, plastid	45.69	30.0
CDY51537	Canola	cytosol, peroxisome, plastid	44.83	29.27
CDY34568	Canola	cytosol	11.49	28.57
CDY08060	Canola	plastid	27.59	27.12
CDX74112	Canola	plastid	27.3	26.84
CDY18847	Canola	cytosol	22.99	24.54
CDX82702	Canola	nucleus	17.82	13.78
CDY05716	Canola	cytosol	27.59	8.91
CDY35922	Canola	cytosol	27.59	8.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078FWJ8	UniProt:A0A078FWJ8
EnsemblPlants:CDY18810	ProteinID:CDY18810	ProteinID:CDY18810.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0040007	GO:GO:0045926	GO:GO:1904526	EnsemblPlantsGene:GSBRNA2T00005977001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF198	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253ED9C
SEG:seg	:	:	:	:	:

Description

BnaAnng02750DBnaAnng02750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWJ8]

Coordinates

chrLK032089:+:295156..298305

Molecular Weight (calculated)

38728.8 Da

IEP (calculated)

5.857

GRAVY (calculated)

-0.345

Length

348 amino acids

Sequence
(BLAST)

001: MGHFSSMFNS LARSFSNKKD NNNGKSNAKE AADEMAREAK KKAMILKSSG CVNADGSNNL ASVFSRRGEK GVNQDCAIVW EGFGCQEEMI FCGIFDGHGP
101: WGHFVSKQVR NSMPISLLCN WQETLSQTTL VEPETDQRFA IWKHLYLKTC ADVDQELQHH RKIDTFNSGT TALTVVRQGE VIYVANVGDS RAVLATVSEE
201: GSLTAVQLTV DFKPNIPQEE ERIIGCNGRV FCLEDEPGVH RVWQPEEESP GLAMSRAFGD YCIKEYGLVS VPEVTQRHIS TRDQFVILAT DGVWDVISNE
301: EAIDIVSSTA ERPKAAKRLV EQAVKAWNKK RRGIAMDDIS AVCLFFHS

Best Arabidopsis Sequence Match ( AT3G05640.3 )
(BLAST)

001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL

Arabidopsis Description

Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.