Factsheet for GSMUA_Achr8P10330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	84.29	86.26
VIT_14s0060g02070.t01	Wine grape	mitochondrion	70.86	67.76
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	70.86	67.21
TraesCS1A01G228100.1	Wheat	mitochondrion	64.86	67.16
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	70.86	66.85
TraesCS1B01G242300.1	Wheat	mitochondrion	64.57	66.67
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	69.43	66.21
KRH33864	Soybean	nucleus	69.43	66.03
KRG92929	Soybean	nucleus	69.14	65.94
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	64.0	65.88
TraesCS1B01G242200.1	Wheat	mitochondrion	63.71	65.78
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	68.57	65.4
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	64.86	65.23
CDY18810	Canola	cytosol, nucleus, peroxisome	64.86	65.23
AT3G05640.1	Thale cress	cytosol, mitochondrion, peroxisome	66.29	64.8
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	65.14	64.77
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	64.86	64.31
Bra036606.1-P	Field mustard	nucleus	67.14	63.0
AT5G27930.1	Thale cress	nucleus	66.86	62.73
CDY19742	Canola	nucleus	66.86	62.73
CDY53338	Canola	cytosol, mitochondrion, nucleus	66.29	62.2
Zm00001d037949_P001	Maize	mitochondrion	62.57	62.04
TraesCS1D01G229700.1	Wheat	mitochondrion	64.86	61.68
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	40.0	61.67
Os05t0358500-01	Rice	mitochondrion	62.0	61.47
CDY25013	Canola	nucleus	65.43	61.07
CDY05554	Canola	nucleus	64.0	60.87
Bra020569.1-P	Field mustard	nucleus	64.86	60.53
TraesCS1D01G229600.2	Wheat	mitochondrion	63.14	60.22
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	63.14	60.05
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	63.71	59.79
HORVU1Hr1G059130.3	Barley	mitochondrion	64.29	59.68
Solyc01g065700.2.1	Tomato	nucleus	61.14	59.28
KRH50799	Soybean	cytosol	62.0	59.13
PGSC0003DMT400015950	Potato	plastid	59.71	58.38
KRH02293	Soybean	cytosol	62.29	57.98
CDY50503	Canola	nucleus	57.43	57.27
CDY67911	Canola	nucleus	57.43	57.27
AT3G16800.2	Thale cress	nucleus	57.14	56.98
Bra021202.1-P	Field mustard	nucleus	57.14	56.98
VIT_05s0077g01820.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	65.14	56.72
Bra022179.1-P	Field mustard	nucleus	54.29	54.13
CDX95903	Canola	nucleus	54.0	53.85
CDX92097	Canola	nucleus	53.43	53.28
TraesCS1A01G228200.1	Wheat	mitochondrion	55.71	50.65
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	42.0	46.82
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	19.14	46.53
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	46.29	46.29
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	34.86	45.86
GSMUA_Achr7P09260_001	Banana	nucleus	41.14	43.24
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	41.43	41.43
GSMUA_Achr6P27920_001	Banana	mitochondrion	45.71	41.24
GSMUA_Achr8P28420_001	Banana	plastid	47.14	40.05
GSMUA_Achr9P07440_001	Banana	nucleus	46.57	39.95
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	44.29	36.82
GSMUA_Achr9P01810_001	Banana	plastid	45.71	36.78
GSMUA_Achr9P24510_001	Banana	plastid	43.14	35.95
GSMUA_Achr8P17470_001	Banana	plastid	47.71	35.76
GSMUA_Achr3P04090_001	Banana	plastid	45.43	34.87
GSMUA_Achr5P22360_001	Banana	plastid	44.57	33.33
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	11.71	33.06
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.0	28.77
GSMUA_Achr3P24900_001	Banana	cytosol	28.0	26.13
GSMUA_Achr8P05980_001	Banana	cytosol	26.0	22.81
GSMUA_Achr10P...	Banana	mitochondrion	24.86	19.77
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	25.43	16.48
GSMUA_Achr10P...	Banana	cytosol	26.0	8.89

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G10330_001	EnsemblPlants:GSMUA_Achr8P10330_001	EnsemblPlants:GSMUA_Achr8T10330_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TP86	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF198	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294F3FD
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 73 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10330_001]

Coordinates

chr8:+:7365266..7367314

Molecular Weight (calculated)

38573.1 Da

IEP (calculated)

7.297

GRAVY (calculated)

-0.223

Length

350 amino acids

Sequence
(BLAST)

001: MRQISSLFNG LAKSLYAGKR KVTGAEEGRE AADELRSEAK KNDMILRSSG SIRSAGSKSL VSVFSQRGEK GVNQDCSIVW EEFGCQEDMM FCGVFDGHGP
101: WGHYVAKKVL KSLPSSLLCN WQESLALASL VADKKLCNFD LWKQAYLRAC GVVDKELEHD RSLDSFHSGT TALTIVKQGE LMVIANVGDS RAVLATASDD
201: GSLVPIQLTI DFKPNLPQEA ERITESKGRV LCLRDEPGVH RVWLPDEDAP GLAMSRAFGD YCIKDYGLIS VPEVTQRSIT SRDQFVVLAT DGVWDVISNQ
301: EAVDIVSSTK DRRKAAKRLV ERAVCAWKRK RRGIAADDCS AICMFLQSTL

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.