Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
- peroxisome 1
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040228.1-P | Field mustard | cytosol, peroxisome, plastid | 46.12 | 73.19 |
| AT3G06270.1 | Thale cress | cytosol | 70.32 | 44.25 |
| Bra001189.1-P | Field mustard | plastid | 68.95 | 42.66 |
| CDX74112 | Canola | plastid | 68.95 | 42.66 |
| CDY08060 | Canola | plastid | 68.95 | 42.66 |
| GSMUA_Achr10P... | Banana | mitochondrion | 82.65 | 41.14 |
| Bra040230.1-P | Field mustard | cytosol | 60.27 | 40.49 |
| CDY18847 | Canola | cytosol | 60.27 | 40.49 |
| VIT_05s0020g02360.t01 | Wine grape | cytosol | 69.86 | 39.33 |
| Solyc01g080400.2.1 | Tomato | cytosol | 72.15 | 38.16 |
| KRH50972 | Soybean | cytosol | 73.52 | 38.06 |
| PGSC0003DMT400081764 | Potato | cytosol | 71.69 | 37.92 |
| KRH02158 | Soybean | cytosol | 71.23 | 37.5 |
| GSMUA_Achr8P05980_001 | Banana | cytosol | 67.58 | 37.09 |
| Os07t0646100-00 | Rice | plasma membrane | 63.01 | 36.9 |
| KRH20951 | Soybean | plastid | 72.15 | 36.66 |
| KRH11326 | Soybean | cytosol, mitochondrion, nucleus, plastid | 72.15 | 36.66 |
| GSMUA_Achr3P24900_001 | Banana | cytosol | 58.45 | 34.13 |
| Zm00001d022347_P001 | Maize | mitochondrion | 66.21 | 31.39 |
| Zm00001d007050_P001 | Maize | mitochondrion | 63.01 | 30.4 |
| EER99809 | Sorghum | plastid | 63.01 | 30.26 |
| TraesCS2D01G144500.3 | Wheat | cytosol | 63.47 | 30.15 |
| TraesCS2B01G166100.3 | Wheat | cytosol | 63.47 | 29.76 |
| TraesCS2A01G141100.2 | Wheat | cytosol | 63.47 | 29.64 |
| GSMUA_Achr6P17190_001 | Banana | endoplasmic reticulum, vacuole | 13.7 | 20.83 |
| GSMUA_Achr3P24880_001 | Banana | cytosol, plastid | 46.12 | 18.7 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 28.77 | 18.0 |
| GSMUA_Achr2P15710_001 | Banana | cytosol, peroxisome, plastid | 25.11 | 17.52 |
| GSMUA_Achr7P09260_001 | Banana | nucleus | 26.03 | 17.12 |
| GSMUA_Achr11P... | Banana | mitochondrion | 26.48 | 16.96 |
| GSMUA_Achr4P01590_001 | Banana | cytosol, peroxisome, plastid | 25.57 | 16.0 |
| GSMUA_Achr6P27920_001 | Banana | mitochondrion | 28.31 | 15.98 |
| GSMUA_Achr8P28420_001 | Banana | plastid | 29.68 | 15.78 |
| GSMUA_Achr9P07440_001 | Banana | nucleus | 27.85 | 14.95 |
| GSMUA_Achr9P01810_001 | Banana | plastid | 29.68 | 14.94 |
| GSMUA_Achr7P22300_001 | Banana | cytosol, peroxisome, plastid | 27.4 | 14.25 |
| GSMUA_Achr8P17470_001 | Banana | plastid | 30.14 | 14.13 |
| GSMUA_Achr9P24510_001 | Banana | plastid | 26.94 | 14.05 |
| GSMUA_Achr6P17200_001 | Banana | cytosol, mitochondrion | 7.76 | 13.71 |
| GSMUA_Achr10P... | Banana | cytosol | 61.64 | 13.18 |
| GSMUA_Achr3P04090_001 | Banana | plastid | 25.57 | 12.28 |
| GSMUA_Achr5P22360_001 | Banana | plastid | 24.2 | 11.32 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P21680_001 | EnsemblPlants:GSMUA_Achr5T21680_001 | EnsemblPlantsGene:GSMUA_Achr5G21680_001 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:IPR001932 | InterPro:IPR036457 | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR24353 | PANTHER:PTHR24353:SF115 | PFAM:PF00481 | PFscan:PS51746 | SEG:seg | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI000295B3A0 | UniProt:M0T0J3 | MapMan:35.1 | : | : |
Description
Probable protein phosphatase 2C 35 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21680_001]
Coordinates
chr5:+:23799209..23807957
Molecular Weight (calculated)
23882.1 Da
IEP (calculated)
4.050
GRAVY (calculated)
0.008
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGTTAITVL VSGGALYVAN VGDSRAVAGV WNGNRVVAED LSSDQTPYRK DEYERVRLSG ARVLCVDQVE GMMDPDIQSW GDEEDGDGDP PRLWVQNGMY
101: PGTAFTRSVG DSTAESIGVI AIPEVKTVKI TPNHLFFVVA SDGIFEFLSS QAVVDMVSRF VDPQDACSAI AAESYKLWLE HENRTDDITI IVVQIKDMVA
201: VSSTFCYLIL GEFPLNNNF
101: PGTAFTRSVG DSTAESIGVI AIPEVKTVKI TPNHLFFVVA SDGIFEFLSS QAVVDMVSRF VDPQDACSAI AAESYKLWLE HENRTDDITI IVVQIKDMVA
201: VSSTFCYLIL GEFPLNNNF
001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE
Arabidopsis Description
Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.