Factsheet for PGSC0003DMT400081764

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080400.2.1	Tomato	cytosol	99.03	99.03
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	24.88	74.64
VIT_05s0020g02360.t01	Wine grape	cytosol	67.63	71.98
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.92	71.69
AT3G06270.1	Thale cress	cytosol	60.14	71.55
CDY08060	Canola	plastid	59.66	69.77
Bra040230.1-P	Field mustard	cytosol	54.59	69.33
CDY18847	Canola	cytosol	54.35	69.02
CDX74112	Canola	plastid	58.94	68.93
Bra001189.1-P	Field mustard	plastid	58.7	68.64
KRH50972	Soybean	cytosol	67.87	66.43
KRH02158	Soybean	cytosol	65.46	65.14
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	67.39	64.73
KRH20951	Soybean	plastid	67.39	64.73
GSMUA_Achr10P...	Banana	mitochondrion	59.9	56.36
GSMUA_Achr8P05980_001	Banana	cytosol	52.9	54.89
GSMUA_Achr3P24900_001	Banana	cytosol	46.62	51.47
Os07t0646100-00	Rice	plasma membrane	45.17	50.0
TraesCS2D01G144500.3	Wheat	cytosol	48.07	43.17
TraesCS2A01G141100.2	Wheat	cytosol	48.55	42.86
EER99809	Sorghum	plastid	47.1	42.76
TraesCS2B01G166100.3	Wheat	cytosol	48.07	42.61
Zm00001d007050_P001	Maize	mitochondrion	45.89	41.85
Zm00001d022347_P001	Maize	mitochondrion	45.89	41.13
PGSC0003DMT400005637	Potato	cytosol	14.73	31.28
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	40.34	30.93
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	23.43	26.43
PGSC0003DMT400015950	Potato	plastid	21.98	25.42
PGSC0003DMT400047180	Potato	plastid	24.4	21.4
PGSC0003DMT400030965	Potato	nucleus	22.95	21.35
PGSC0003DMT400060345	Potato	plastid	24.15	21.28
PGSC0003DMT400055813	Potato	plastid	23.67	20.85
PGSC0003DMT400027278	Potato	cytosol	20.53	20.83
PGSC0003DMT400028836	Potato	nucleus	22.22	20.35
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	22.22	17.86
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	22.71	17.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102595641	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M1D512	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400032110	PGSC:PGSC0003DMG400032110	EnsemblPlants:PGSC0003DMT400081764	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353	PANTHER:PTHR24353:SF115
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295B142	RefSeq:XP_006365284.1	SEG:seg	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400032110]

Coordinates

chr1:-:60945180..60952491

Molecular Weight (calculated)

45161.1 Da

IEP (calculated)

4.564

GRAVY (calculated)

-0.417

Length

414 amino acids

Sequence
(BLAST)

001: MGCVHGKCCC RYPRSSDGDN REDLGRYAQV QTHILAGRSV ESAQVPSHNF RLEYSVLTQR GFYPESPEKE NQDSYCIRTQ LQGNPNVHFF GVFDGHGQFG
101: TECSVFVRDR LVEILSNDST LLDDPVKAYN SAFSITNEEL HDSDIDDSMS GTTAITALLV GDMLYVANVG DSRAVMAVKE GNRVVAKDLS SDQTPFRKDE
201: CERVKSCGAR VLSVDQVEGL KDPDIQSWGD EETEGGDPPR LWVQNGMYPG TAFTRSVGDS TAESIGVVSV PEVTTVHLTA HHPFFVVASD GVFEFLSSQT
301: VVDMVNRSAD PRDASSAIAG ESYKLWLDHE NRTDDITIII VHIKALSNSG GGATAKRNGG RTTNTEKETS EIYFTPSASE GYRSVRSELS EVSCCQTVSS
401: SDQSSRVVVS SSLD

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.