Factsheet for PGSC0003DMT400005637

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g065670.2.1	Tomato	peroxisome	93.85	59.8
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	62.56	59.51
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	96.41	55.95
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	86.15	50.6
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	17.44	40.48
VIT_04s0008g00740.t01	Wine grape	cytosol	70.77	39.54
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	59.49	36.94
CDY28276	Canola	cytosol	61.54	36.81
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	64.62	36.73
Bra034542.1-P	Field mustard	cytosol	60.51	36.2
GSMUA_Achr7P09260_001	Banana	nucleus	61.03	35.74
CDX72381	Canola	cytosol	59.49	35.58
CDY45023	Canola	cytosol	59.49	35.58
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	60.0	35.35
Bra037033.1-P	Field mustard	cytosol	57.95	34.66
CDY13509	Canola	cytosol	57.95	34.66
AT4G32950.1	Thale cress	cytosol	57.95	34.66
CDX80553	Canola	cytosol	60.0	34.62
Bra009875.1-P	Field mustard	cytosol	58.97	34.02
CDX88210	Canola	cytosol	58.97	34.02
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	59.49	33.72
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	58.46	31.93
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	58.46	31.75
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	57.44	31.64
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	57.95	31.3
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	54.87	28.38
EES04776	Sorghum	cytosol, peroxisome, plastid	54.87	28.08
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	54.87	27.51
PGSC0003DMT400027278	Potato	cytosol	55.9	26.72
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	49.23	26.16
PGSC0003DMT400015950	Potato	plastid	45.13	24.58
KRH15511	Soybean	cytosol, nucleus, peroxisome	29.74	24.37
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	55.38	23.79
PGSC0003DMT400030965	Potato	nucleus	51.79	22.7
PGSC0003DMT400028836	Potato	nucleus	51.79	22.35
PGSC0003DMT400060345	Potato	plastid	53.33	22.13
PGSC0003DMT400047180	Potato	plastid	53.33	22.03
PGSC0003DMT400055813	Potato	plastid	52.31	21.7
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	16.92	20.75
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	53.85	20.39
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	52.82	18.66
PGSC0003DMT400081764	Potato	cytosol	31.28	14.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0ZQ73	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400002208	PGSC:PGSC0003DMG400002208	EnsemblPlants:PGSC0003DMT400005637	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00029664E8
SEG:seg	:	:	:	:	:

Description

Protein phosphatase-2c [Source:PGSC_GENE;Acc:PGSC0003DMG400002208]

Coordinates

chr8:+:36803307..36804175

Molecular Weight (calculated)

21449.5 Da

IEP (calculated)

4.659

GRAVY (calculated)

-0.135

Length

195 amino acids

Sequence
(BLAST)

001: MDKDIKSLEK LDCSCSGTTT VVAIRQDDDL IIANLGDSRA ILGRKTEEGI IEAVQLTTDL KPSLPSEAER IRNCDGRVLA LKEEPHIQRV WLPHEDVPGL
101: AMSRAFGDFM LKNYGIISKP DVSYHHISPN DQFLVLATDG VWDVLSNDQV ISIVCATNNA AAAAEAVVQA SLDAWKQKFP NSKRDDSTVI CLFLQ

Best Arabidopsis Sequence Match ( AT1G79630.3 )
(BLAST)

001: MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML KSCQQIDKEL
101: KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS DSPGLAMARA
201: FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ DSSVAMEVST
301: NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.