Factsheet for Solyc08g065680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005637	Potato	cytosol	59.51	62.56
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	78.54	48.49
Solyc08g065670.2.1	Tomato	peroxisome	65.37	43.79
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	64.88	39.58
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	15.61	38.1
VIT_04s0008g00740.t01	Wine grape	cytosol	46.83	27.51
KRH15511	Soybean	cytosol, nucleus, peroxisome	31.22	26.89
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	43.41	26.89
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	44.39	26.45
GSMUA_Achr7P09260_001	Banana	nucleus	41.95	25.83
Bra009875.1-P	Field mustard	cytosol	41.95	25.44
CDX88210	Canola	cytosol	41.95	25.44
CDX80553	Canola	cytosol	41.46	25.15
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	41.95	25.07
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	36.59	23.89
CDY28276	Canola	cytosol	35.61	22.39
Bra034542.1-P	Field mustard	cytosol	35.61	22.39
AT4G32950.1	Thale cress	cytosol	35.61	22.39
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	38.05	21.85
CDX72381	Canola	cytosol	34.63	21.78
CDY45023	Canola	cytosol	34.63	21.78
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	38.05	21.73
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	38.05	21.61
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	37.07	21.47
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	40.49	21.34
Bra037033.1-P	Field mustard	cytosol	33.66	21.17
CDY13509	Canola	cytosol	33.66	21.17
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	38.54	20.95
EES04776	Sorghum	cytosol, peroxisome, plastid	38.05	20.47
Solyc04g056560.2.1	Tomato	cytosol	38.54	19.7
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	34.63	19.35
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	40.0	18.06
Solyc01g065700.2.1	Tomato	nucleus	31.22	17.73
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	13.66	17.61
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	36.1	16.34
Solyc05g055790.2.1	Tomato	plastid	37.07	16.17
Solyc07g054300.2.1	Tomato	plastid	36.59	15.89
Solyc10g076320.1.1	Tomato	nucleus	33.66	15.83
Solyc10g008490.2.1	Tomato	plastid	35.61	15.56
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	37.07	14.76
Solyc10g005640.2.1	Tomato	nucleus	37.56	13.85
Solyc01g080400.2.1	Tomato	cytosol	25.85	12.8
Solyc05g018300.2.1	Tomato	cytosol	27.32	5.19

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CLE7	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc08g065680.1	EnsemblPlants:Solyc08g065680.1.1	UniParc:UPI000276B6DD	SEG:seg

Description

No Description!

Coordinates

chr8:+:53925230..53927307

Molecular Weight (calculated)

22538.6 Da

IEP (calculated)

5.042

GRAVY (calculated)

-0.166

Length

205 amino acids

Sequence
(BLAST)

001: MRRNFNKWQK ACWSSFMVID RDIKSLENLD CSFSGTTAVV AIRQDDDLVI ANLGDSRAVL GRKTEEGVIE MTRSFGDFML KYFGIISEPD VSYHHITPND
101: QFVVLATDGV WNVLSNNQVV SIVRATNNAA AATETVVQVS LDAWKQRFPN SKRDDSTVIC LYLQQGASLK NGVEVGVGAG GEDSLVAGGV EESLRLGWRG
201: RSSGW

Best Arabidopsis Sequence Match ( AT5G26010.1 )
(BLAST)

001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S

Arabidopsis Description

Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.