Factsheet for TraesCS6A01G187700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	95.57	96.1
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	94.74	95.8
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	93.35	95.2
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	76.18	72.94
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	77.84	72.24
EES04776	Sorghum	cytosol, peroxisome, plastid	75.9	71.92
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	30.19	68.55
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	53.19	61.15
PGSC0003DMT400005637	Potato	cytosol	31.3	57.95
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	72.02	57.27
GSMUA_Achr7P09260_001	Banana	nucleus	51.25	55.56
Solyc08g065670.2.1	Tomato	peroxisome	43.77	51.63
VIT_04s0008g00740.t01	Wine grape	cytosol	49.86	51.58
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	47.37	49.85
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	45.43	48.81
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	46.26	48.55
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	44.32	48.19
CDY45023	Canola	cytosol	43.21	47.85
Bra034542.1-P	Field mustard	cytosol	43.21	47.85
KRH15511	Soybean	cytosol, nucleus, peroxisome	30.75	46.64
CDY28276	Canola	cytosol	42.11	46.63
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	42.66	46.53
CDX80553	Canola	cytosol	43.49	46.45
AT4G32950.1	Thale cress	cytosol	41.27	45.71
CDX72381	Canola	cytosol	41.0	45.4
CDY13509	Canola	cytosol	40.72	45.09
Bra037033.1-P	Field mustard	cytosol	40.72	45.09
CDX88210	Canola	cytosol	42.11	44.97
Bra009875.1-P	Field mustard	cytosol	42.11	44.97
TraesCS1A01G228100.1	Wheat	mitochondrion	40.72	43.49
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	39.89	38.61
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.61	38.05
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	44.04	37.15
TraesCS5A01G150700.1	Wheat	cytosol	43.21	36.53
TraesCS1A01G228200.1	Wheat	mitochondrion	33.52	31.43
TraesCS7A01G241800.1	Wheat	nucleus	45.43	31.3
TraesCS6A01G193100.1	Wheat	mitochondrion	43.49	30.31
TraesCS2A01G274100.1	Wheat	mitochondrion	42.94	29.36
TraesCS2A01G141100.2	Wheat	cytosol	26.04	20.04
TraesCS6A01G191000.1	Wheat	plastid	28.81	9.58

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6A01G187700	EnsemblPlants:TraesCS6A01G187700.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:224278504..224282037

Molecular Weight (calculated)

38396.5 Da

IEP (calculated)

5.957

GRAVY (calculated)

-0.210

Length

361 amino acids

Sequence
(BLAST)

001: MGICASSEHL AQQGQEADES IVYVMDEEGG GGASSPRKVA SLFSQKGKKG PNQDAVILCQ GFGMEGGVFC GVFDGHGRCG HLVSKLVRDY LPFMVLSHRN
101: ALLLADADAD ADDPVFSDAS PSSSADSSGN SSPHPSQMLG EWREACTNAF KAMDNELKLQ ANMDCNFSGT TAVCAIKQGK DLIIANLGDS RAVLATMSGA
201: GYLKAVQLTT DQKPGLPEEA ERIKRCEGRV FALREEPGVM RVWLPGENLP GLAMARALGD SRLKHHGVIS TPQVTGHRIG DADLFIILAT DGVWDVLSNE
301: EVVSIVCATP RKQHASKAVV EAAVQRWKTK YPSSRVDDCS AVCLFLHDHG ASAPQRPGSS S

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.