Factsheet for TraesCS7A01G241800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G049260.4	Barley	nucleus	95.99	96.55
TraesCS7D01G240800.1	Wheat	mitochondrion	98.66	89.91
TraesCS7B01G137400.2	Wheat	plastid	98.28	89.57
Os08t0500300-01	Rice	plasma membrane	80.34	79.28
Zm00001d052852_P001	Maize	plastid	76.14	76.29
Zm00001d031329_P002	Maize	nucleus	78.82	75.78
KXG25674	Sorghum	mitochondrion	79.58	72.9
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	59.92	61.45
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	16.03	58.33
CDY33350	Canola	cytosol, nucleus, plastid	51.91	56.67
CDY35072	Canola	cytosol, peroxisome, plastid	51.72	56.22
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	51.53	56.02
CDX88554	Canola	nucleus	50.57	55.44
AT1G79630.1	Thale cress	nucleus	53.05	55.16
Bra035131.1-P	Field mustard	nucleus	50.95	54.83
AT1G16220.1	Thale cress	nucleus	51.34	54.79
CDX87369	Canola	nucleus	50.95	54.27
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	52.86	53.79
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	51.91	52.82
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	41.41	50.7
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	50.95	48.37
Solyc10g005640.2.1	Tomato	nucleus	50.38	47.48
TraesCS1A01G228100.1	Wheat	mitochondrion	30.53	47.34
TraesCS5A01G150700.1	Wheat	cytosol	37.6	46.14
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	31.3	45.43
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	30.34	42.63
Zm00001d008472_P001	Maize	cytosol	12.4	41.94
TraesCS6A01G193100.1	Wheat	mitochondrion	40.65	41.12
TraesCS2A01G274100.1	Wheat	mitochondrion	39.12	38.83
TraesCS1A01G228200.1	Wheat	mitochondrion	26.91	36.62
TraesCS2A01G141100.2	Wheat	cytosol	17.94	20.04
TraesCS6A01G191000.1	Wheat	plastid	22.14	10.68

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS7A01G241800	EnsemblPlants:TraesCS7A01G241800.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:217374097..217377955

Molecular Weight (calculated)

56942.7 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.461

Length

524 amino acids

Sequence
(BLAST)

001: MGSCLSTQPG DEPAWPLRWR KRPHGEREGT AAAGAFFSGG GAGGGGKKLP GEGEMTEEEL ARVPGRTCAN GASAAACLHT QQGRKGTNQD AMVVWESFNS
101: NDSVFCGVFD GHGPYGHFVA KKVRDSLPVK LLAQWKTSAN VGTSPHLNGS ISGSLNSEET ASAVDDEWGE SADVEGSDML PETFLPLKQS YLKAFKLMDK
201: ELKMHPTIDC FCSGSTAVTL VKQGWDLVVG NLGDSRAVMA TRDAANNLTA VQLTVDLKPN LPKEAERIQQ CRGRVFALQD EPEVSRVWLP NNDSPGLAMA
301: RAFGDFCLKD YGLISVPQIS YRRLTEKDEF IILATDGVWD VLSNKEAIDI VAAAPSRATA SRALVDCAVR SWRLKFPTSK SDDCAAVCLF LDHEKSPTLV
401: EESEAENEKA EPAKDALISD AGDKINEDIA DVNEHISREE HIPEPTLEHS STLRNVDEIM PVDEPPVSKE PERCGSARSL ADCISTNEEE EWSALEGVTR
501: VNSLLNLPRK LSGDKKSTSW KKRR

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.