CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35072	Canola	cytosol, peroxisome, plastid	96.04	95.64
AT1G16220.1	Thale cress	nucleus	86.88	84.93
CDX88554	Canola	nucleus	72.71	73.01
CDX87369	Canola	nucleus	74.79	72.97
CDY72270	Canola	cytosol	27.71	63.03
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	45.83	62.86
GSMUA_Achr3P04090_001	Banana	plastid	54.38	57.24
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	60.42	56.75
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	16.67	55.56
GSMUA_Achr5P22360_001	Banana	plastid	53.96	55.34
CDY46975	Canola	cytosol, mitochondrion, peroxisome	35.42	54.66
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	57.71	53.79
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	57.71	53.79
CDX91383	Canola	cytosol	35.83	53.75
Zm00001d052852_P001	Maize	plastid	57.5	52.77
Os08t0500300-01	Rice	plasma membrane	57.92	52.35
TraesCS7A01G241800.1	Wheat	nucleus	56.67	51.91
HORVU7Hr1G049260.4	Barley	nucleus	56.25	51.82
CDY70364	Canola	cytosol, peroxisome	38.54	51.1
Zm00001d031329_P002	Maize	nucleus	57.29	50.46
CDY00978	Canola	cytosol	36.67	50.14
CDX89881	Canola	plastid	44.38	50.12
CDY53741	Canola	plastid	48.54	49.89
CDY69821	Canola	plastid	40.83	49.87
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	57.29	49.82
CDY53743	Canola	plastid	48.54	49.79
CDY15466	Canola	cytosol, peroxisome, plastid	43.96	49.76
Solyc10g005640.2.1	Tomato	nucleus	56.67	48.92
KXG25674	Sorghum	mitochondrion	57.5	48.25
CDY37649	Canola	mitochondrion, plastid	42.92	47.91
CDY51389	Canola	cytosol, peroxisome, plastid	41.88	47.52
TraesCS7D01G240800.1	Wheat	mitochondrion	56.88	47.48
CDY21964	Canola	plastid	43.33	47.38
TraesCS7B01G137400.2	Wheat	plastid	56.67	47.3
CDY48559	Canola	plastid	43.33	47.27
CDY63003	Canola	mitochondrion, plastid	43.12	47.26
CDY56581	Canola	cytosol	33.33	47.06
CDX92009	Canola	plastid	46.25	46.93
CDX74239	Canola	plastid	46.46	45.88
CDY40298	Canola	cytosol, peroxisome, plastid	33.12	44.04
CDX97493	Canola	cytosol	30.42	43.98
CDY18810	Canola	cytosol, nucleus, peroxisome	31.46	43.39
CDY28706	Canola	cytosol, peroxisome, plastid	47.71	43.21
CDY51537	Canola	cytosol, peroxisome, plastid	47.29	42.59
CDY05554	Canola	nucleus	31.46	41.03
CDY53338	Canola	cytosol, mitochondrion, nucleus	31.67	40.75
Zm00001d008472_P001	Maize	cytosol	13.12	40.65
CDY28276	Canola	cytosol	27.5	40.49
CDY19742	Canola	nucleus	31.46	40.48
CDX72381	Canola	cytosol	27.29	40.18
CDX80553	Canola	cytosol	28.12	39.94
CDY67911	Canola	nucleus	29.17	39.89
CDY50503	Canola	nucleus	29.17	39.89
CDX95903	Canola	nucleus	29.17	39.89
CDY45023	Canola	cytosol	27.08	39.88
CDY25013	Canola	nucleus	31.04	39.73
CDX88210	Canola	cytosol	27.92	39.65
CDX92097	Canola	nucleus	28.96	39.6
CDY13509	Canola	cytosol	26.88	39.57
CDY34568	Canola	cytosol	11.25	38.57
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	30.42	37.92
CDX74112	Canola	plastid	17.08	23.16
CDY08060	Canola	plastid	16.67	22.6
CDY18847	Canola	cytosol	14.38	21.17
CDX82702	Canola	nucleus	15.83	16.89
CDY05716	Canola	cytosol	24.38	10.86
CDY35922	Canola	cytosol	24.38	10.82

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078H3W7	UniProt:A0A078H3W7
EnsemblPlants:CDY33350	ProteinID:CDY33350	ProteinID:CDY33350.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00054192001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EDCD09	SEG:seg	:	:	:

Description

BnaC05g12330DBnaC05g12330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3W7]

Coordinates

chrLK032312:-:209465..211486

Molecular Weight (calculated)

53011.2 Da

IEP (calculated)

5.319

GRAVY (calculated)

-0.317

Length

480 amino acids

Sequence
(BLAST)

001: MGLCSSKINK TTRNGTETTS AATTTVERQG SGRLRREKDL ISGGEINEAE QLVGRLVGNG SSELACLYTQ QGSKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVA KRVRDMLPFT LSTQLKKTLG MDSTSVINSA TCIDEEQWCE KEDKLPLPEM YLPLKRALLK TCQQMDKELK MHPTINCFCS GTTSVTVIKQ
201: GKHLVVGNIG DSRAVLATRD DDNALIAVQL TIDLKPDLPS ESARIQKCKG RVFALQDEPE VARVWLPNSD SPGLAMARAF GDFCLKDYGL ISVPDINYRR
301: LTERDQFIIL ATDGVWDVLS NKEAVDIVAS APSRNTAARA LVCTAVRAWR LKYPTSKNDD CAVVCLFLED SASMEVLETV VHSRKESIES VNITSSKDGE
401: KKEEALAETD EIVPVLEMKE AKTTESCRTE SKKTTLAECI SVKDDEEWSA LEGLTRVNSL LSIPRFFSGE LRSGSWRKWL

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.