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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67911 Canola nucleus 99.72 99.72
Bra021202.1-P Field mustard nucleus 99.43 99.43
CDX95903 Canola nucleus 91.74 91.74
AT3G16800.2 Thale cress nucleus 91.45 91.45
CDX92097 Canola nucleus 90.6 90.6
GSMUA_Achr11P... Banana mitochondrion 59.54 61.11
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 57.27 57.43
KRH50799 Soybean cytosol 59.83 57.22
CDY18810 Canola cytosol, nucleus, peroxisome 55.56 56.03
KRH02293 Soybean cytosol 59.83 55.85
Solyc01g065700.2.1 Tomato nucleus 56.7 55.12
PGSC0003DMT400015950 Potato plastid 55.84 54.75
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 52.99 54.71
CDY25013 Canola nucleus 57.55 53.87
CDY05554 Canola nucleus 56.41 53.8
CDY19742 Canola nucleus 56.98 53.62
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 53.56 53.26
CDY53338 Canola cytosol, mitochondrion, nucleus 56.41 53.08
VIT_05s0077g01820.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 60.4 52.74
TraesCS1A01G228100.1 Wheat mitochondrion 50.71 52.66
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 51.85 51.7
TraesCS1B01G242300.1 Wheat mitochondrion 49.86 51.62
TraesCS1B01G242200.1 Wheat mitochondrion 49.57 51.33
Zm00001d037949_P001 Maize mitochondrion 51.57 51.27
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 32.76 50.66
Os05t0358500-01 Rice mitochondrion 50.14 49.86
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 52.14 49.73
TraesCS1D01G229700.1 Wheat mitochondrion 50.71 48.37
TraesCS1D01G229600.2 Wheat mitochondrion 49.57 47.41
CDY72270 Canola cytosol 28.49 47.39
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 50.14 47.19
HORVU1Hr1G059130.3 Barley mitochondrion 50.43 46.95
CDY46975 Canola cytosol, mitochondrion, peroxisome 37.04 41.8
TraesCS1A01G228200.1 Wheat mitochondrion 45.58 41.56
CDX91383 Canola cytosol 37.61 41.25
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 29.63 39.1
CDY70364 Canola cytosol, peroxisome 39.03 37.85
CDY40298 Canola cytosol, peroxisome, plastid 38.75 37.67
CDY56581 Canola cytosol 36.47 37.65
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 36.75 36.86
CDY00978 Canola cytosol 36.75 36.75
CDX88210 Canola cytosol 35.33 36.69
CDY45023 Canola cytosol 33.9 36.5
CDX80553 Canola cytosol 35.04 36.39
CDX72381 Canola cytosol 33.05 35.58
CDY28276 Canola cytosol 33.05 35.58
CDY13509 Canola cytosol 32.76 35.28
CDY37649 Canola mitochondrion, plastid 42.45 34.65
CDX97493 Canola cytosol 32.76 34.64
CDY63003 Canola mitochondrion, plastid 41.88 33.56
CDY69821 Canola plastid 37.32 33.33
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 36.18 32.99
CDY34568 Canola cytosol 13.11 32.86
CDY53741 Canola plastid 42.73 32.12
CDY53743 Canola plastid 42.73 32.05
CDX89881 Canola plastid 37.32 30.82
CDX92009 Canola plastid 40.74 30.23
CDX88554 Canola nucleus 41.03 30.13
CDY15466 Canola cytosol, peroxisome, plastid 36.18 29.95
CDY51389 Canola cytosol, peroxisome, plastid 35.61 29.55
CDX87369 Canola nucleus 41.03 29.27
CDY33350 Canola cytosol, nucleus, plastid 39.89 29.17
CDY21964 Canola plastid 36.47 29.16
CDY48559 Canola plastid 36.47 29.09
CDX74239 Canola plastid 39.89 28.81
CDY35072 Canola cytosol, peroxisome, plastid 39.03 28.42
CDY51537 Canola cytosol, peroxisome, plastid 41.88 27.58
CDY28706 Canola cytosol, peroxisome, plastid 41.6 27.55
CDY08060 Canola plastid 23.65 23.45
CDX74112 Canola plastid 23.36 23.16
CDY18847 Canola cytosol 19.66 21.17
CDX82702 Canola nucleus 18.52 14.44
CDY05716 Canola cytosol 26.5 8.64
CDY35922 Canola cytosol 26.5 8.6
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078IN94UniProt:A0A078IN94
EnsemblPlants:CDY50503ProteinID:CDY50503ProteinID:CDY50503.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00096900001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF310SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EEDFCF::::
Description
BnaC01g44410DBnaC01g44410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN94]
Coordinates
chrLK032918:-:33094..35333
Molecular Weight (calculated)
38914.9 Da
IEP (calculated)
7.297
GRAVY (calculated)
-0.181
Length
351 amino acids
Sequence
(BLAST)
001: MVLLPAFLDG LARSVSMKKG KYIPEDEDGG GEIAKSLMKD AKKNSTLLGS SGFVKSETSK RFTSICSNRG EKGINQDRAI VWEEFGCQED ITFCGMFDGH
101: GPWGHVITKR VKKLFPSSLL CQWQQTLASL SLSPECFSPF DIWKQSCLKT FSLIDLDLKI HPSIDSYCSG CTALTAVLQG DHLVVANAGD SRAVIATTSD
201: DGSGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGR SLGLAVSRAF GDYCLKDFGL VSVPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NDEAVEIVRG VKERRKSAKR LVERAMMLWR RKRRSIAMDD ISALCLFFHP S
Best Arabidopsis Sequence Match ( AT3G16800.3 )
(BLAST)
001: MVLLPAFLDG LARTVSTKKG KKLSEDEDGG REIAKSMIKD SKKNSTLLGT SGFVSSESSK RFTSICSNRG EKGINQDRAI VWEGFGCQED ITFCGMFDGH
101: GPWGHVIAKR VKKSFPSSLL CQWQQTLASL SSSPECSSPF DLWKQACLKT FSIIDLDLKI SPSIDSYCSG CTALTAVLQG DHLVIANAGD SRAVIATTSD
201: DGNGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGG SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NNEAVEIVRG VKERRKSAKR LVERAVTLWR RKRRSIAMDD ISVLCLFFRP S
Arabidopsis Description
Probable protein phosphatase 2C 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.