CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34568	Canola	cytosol	37.95	90.0
CDX91383	Canola	cytosol	81.02	84.06
CDY00978	Canola	cytosol	84.94	80.34
CDY46975	Canola	cytosol, mitochondrion, peroxisome	74.1	79.1
CDY72270	Canola	cytosol	50.0	78.67
CDY56581	Canola	cytosol	80.12	78.24
CDY70364	Canola	cytosol, peroxisome	83.43	76.52
CDY37649	Canola	mitochondrion, plastid	84.64	65.35
CDY63003	Canola	mitochondrion, plastid	85.54	64.84
AT5G36250.2	Thale cress	plastid	78.61	56.49
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	20.48	39.77
KRH36356	Soybean	cytosol	24.7	39.42
KRG93121	Soybean	plastid	40.06	36.44
CDY53741	Canola	plastid	50.6	35.97
CDY53743	Canola	plastid	50.6	35.9
CDX92009	Canola	plastid	49.7	34.88
CDY69821	Canola	plastid	40.36	34.1
CDY40298	Canola	cytosol, peroxisome, plastid	37.05	34.07
CDX74239	Canola	plastid	49.4	33.74
KRH01535	Soybean	cytosol	45.78	33.41
CDY50503	Canola	nucleus	34.64	32.76
CDY67911	Canola	nucleus	34.64	32.76
CDY51537	Canola	cytosol, peroxisome, plastid	51.51	32.08
CDY28706	Canola	cytosol, peroxisome, plastid	50.9	31.89
CDX95903	Canola	nucleus	33.13	31.34
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	35.84	30.91
CDX92097	Canola	nucleus	32.53	30.77
CDY51389	Canola	cytosol, peroxisome, plastid	38.86	30.5
CDX80553	Canola	cytosol	31.02	30.47
CDY15466	Canola	cytosol, peroxisome, plastid	38.86	30.42
CDY33350	Canola	cytosol, nucleus, plastid	43.98	30.42
CDX89881	Canola	plastid	38.86	30.35
CDY35072	Canola	cytosol, peroxisome, plastid	43.98	30.29
CDY18810	Canola	cytosol, nucleus, peroxisome	31.63	30.17
CDY21964	Canola	plastid	39.76	30.07
CDY48559	Canola	plastid	39.76	30.0
CDX88554	Canola	nucleus	43.07	29.92
CDX88210	Canola	cytosol	30.12	29.59
CDX87369	Canola	nucleus	43.67	29.47
CDY05554	Canola	nucleus	32.53	29.35
CDY25013	Canola	nucleus	32.23	28.53
CDY19742	Canola	nucleus	31.93	28.42
CDY53338	Canola	cytosol, mitochondrion, nucleus	31.93	28.42
CDY45023	Canola	cytosol	27.41	27.91
CDX72381	Canola	cytosol	27.11	27.61
CDY28276	Canola	cytosol	27.11	27.61
CDY13509	Canola	cytosol	27.11	27.61
KRH45222	Soybean	nucleus	14.76	21.12
CDY08060	Canola	plastid	18.98	17.8
CDX74112	Canola	plastid	18.67	17.51
CDY18847	Canola	cytosol	16.27	16.56
CDX82702	Canola	nucleus	15.36	11.33
CDY05716	Canola	cytosol	23.19	7.15
CDY35922	Canola	cytosol	23.19	7.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078EDS4	EnsemblPlants:CDX97493
ProteinID:CDX97493	ProteinID:CDX97493.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00104695001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0004EE5B2F	SEG:seg	:	:	:	:

Description

BnaC08g13580D

Coordinates

chrLK031899:+:1276347..1277989

Molecular Weight (calculated)

36950.3 Da

IEP (calculated)

7.139

GRAVY (calculated)

-0.189

Length

332 amino acids

Sequence
(BLAST)

001: MIVWENFGSM EDTVFCGVFD GHGPYGHVIA KRVRDLLPLK VGSHLESYLS CEEVLKEISL NTADRMTSDS LVQISANGES RVYNKDQDMV QMLLTSIVKA
101: YRFMDKELKM QVDVDCFCSG TTAVTMVKQG QHLVVGNIGD SRAVLGTRNK ENKLVPFQLT EDLKPDVPVL AFKHLRRYFG FYQLKLGVLM LPAEAARIKR
201: CNSPGLAMAR AFGDFCFKDF GLISVPDVSY RRLTEKDEFV VLATDWIWDV LTNEEVVEIV AKAPTRCTAG RALVEAAFAS SFDSKPDKLS TASFSVDKHI
301: SNGLTEPDTT STSTPGSGTK SPHTRDNQRV RR

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.