Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72270 | Canola | cytosol | 63.12 | 95.73 |
| CDY34568 | Canola | cytosol | 38.75 | 88.57 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 84.06 | 86.5 |
| CDY00978 | Canola | cytosol | 93.75 | 85.47 |
| CDY70364 | Canola | cytosol, peroxisome | 92.5 | 81.77 |
| CDX97493 | Canola | cytosol | 84.06 | 81.02 |
| CDY56581 | Canola | cytosol | 82.81 | 77.94 |
| CDY37649 | Canola | mitochondrion, plastid | 93.75 | 69.77 |
| CDY63003 | Canola | mitochondrion, plastid | 94.69 | 69.18 |
| AT5G36250.2 | Thale cress | plastid | 88.75 | 61.47 |
| KRH45221 | Soybean | cytosol, mitochondrion, peroxisome | 29.06 | 54.39 |
| KRH36356 | Soybean | cytosol | 30.31 | 46.63 |
| KRG93121 | Soybean | plastid | 47.19 | 41.37 |
| CDY69821 | Canola | plastid | 50.31 | 40.97 |
| CDY53741 | Canola | plastid | 59.69 | 40.9 |
| CDY53743 | Canola | plastid | 59.69 | 40.81 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 45.62 | 40.44 |
| CDX92009 | Canola | plastid | 58.44 | 39.53 |
| KRH01535 | Soybean | cytosol | 55.31 | 38.9 |
| CDX74239 | Canola | plastid | 58.12 | 38.27 |
| CDY50503 | Canola | nucleus | 41.25 | 37.61 |
| CDY67911 | Canola | nucleus | 41.25 | 37.61 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 44.38 | 36.88 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 48.44 | 36.64 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 60.94 | 36.59 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 60.31 | 36.42 |
| CDX89881 | Canola | plastid | 48.12 | 36.24 |
| CDX95903 | Canola | nucleus | 39.69 | 36.18 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 47.5 | 35.85 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 53.75 | 35.83 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 53.75 | 35.68 |
| CDY21964 | Canola | plastid | 48.75 | 35.54 |
| CDX80553 | Canola | cytosol | 37.5 | 35.5 |
| CDY48559 | Canola | plastid | 48.75 | 35.45 |
| CDX92097 | Canola | nucleus | 38.75 | 35.33 |
| CDX88554 | Canola | nucleus | 52.5 | 35.15 |
| CDX88210 | Canola | cytosol | 36.88 | 34.91 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 37.81 | 34.77 |
| CDX87369 | Canola | nucleus | 53.12 | 34.55 |
| CDY05554 | Canola | nucleus | 39.69 | 34.51 |
| CDY45023 | Canola | cytosol | 35.0 | 34.36 |
| CDY28276 | Canola | cytosol | 35.0 | 34.36 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 39.69 | 34.05 |
| CDY19742 | Canola | nucleus | 39.38 | 33.78 |
| CDX72381 | Canola | cytosol | 34.38 | 33.74 |
| CDY13509 | Canola | cytosol | 34.38 | 33.74 |
| CDY25013 | Canola | nucleus | 39.38 | 33.6 |
| KRH45222 | Soybean | nucleus | 15.0 | 20.69 |
| CDY08060 | Canola | plastid | 21.56 | 19.49 |
| CDX74112 | Canola | plastid | 21.25 | 19.21 |
| CDY18847 | Canola | cytosol | 18.75 | 18.4 |
| CDX82702 | Canola | nucleus | 19.38 | 13.78 |
| CDY05716 | Canola | cytosol | 25.31 | 7.52 |
| CDY35922 | Canola | cytosol | 25.31 | 7.49 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078DVX9 | EnsemblPlants:CDX91383 |
| ProteinID:CDX91383 | ProteinID:CDX91383.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00152689001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF510 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EF4A19 | : | : | : | : | : |
Description
BnaC04g07670D
Coordinates
chrLK031867:-:499456..501077
Molecular Weight (calculated)
35820.0 Da
IEP (calculated)
5.705
GRAVY (calculated)
-0.105
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVWENFGSM EDTVFCGVFD GHGPYGHVIA KRVWDLLPLK FGSHLESYLS YEEVLKEISL NTADRMTSDS LVQISANGES RVYNKDQDMV QMLLTSIVKA
101: YRFMDKELKM QVDFDCFCCG TTAVTMVKQG QHLVAGNIGD SRAVLGTRNK EDKLVPFQLT EDLKPDVPAE AARIKRCGGR IFALRDEPGV ARLWLPNHNS
201: PGLAMARAFG DFCLKDFGLI SVSDVSYRRL TEKDEFVVLA TDWIWDVLTN EEVVEIVAKA PTRCTAGRAL VEAAVRNWRW KFPTSKVDDC AVVCLFLDSK
301: PDKLSTASFS VDKHISNGLT
101: YRFMDKELKM QVDFDCFCCG TTAVTMVKQG QHLVAGNIGD SRAVLGTRNK EDKLVPFQLT EDLKPDVPAE AARIKRCGGR IFALRDEPGV ARLWLPNHNS
201: PGLAMARAFG DFCLKDFGLI SVSDVSYRRL TEKDEFVVLA TDWIWDVLTN EEVVEIVAKA PTRCTAGRAL VEAAVRNWRW KFPTSKVDDC AVVCLFLDSK
301: PDKLSTASFS VDKHISNGLT
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.