CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040230.1-P	Field mustard	cytosol	99.39	99.39
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	41.41	97.83
AT3G06270.1	Thale cress	cytosol	89.57	83.91
CDX74112	Canola	plastid	86.5	79.66
CDY08060	Canola	plastid	86.2	79.38
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.49	60.27
VIT_05s0020g02360.t01	Wine grape	cytosol	70.86	59.38
Solyc01g080400.2.1	Tomato	cytosol	69.63	54.83
PGSC0003DMT400081764	Potato	cytosol	69.02	54.35
KRH02158	Soybean	cytosol	68.1	53.37
KRH50972	Soybean	cytosol	69.02	53.19
KRH20951	Soybean	plastid	68.71	51.97
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	67.48	51.04
GSMUA_Achr8P05980_001	Banana	cytosol	56.13	45.86
GSMUA_Achr10P...	Banana	mitochondrion	61.35	45.45
Os07t0646100-00	Rice	plasma membrane	50.31	43.85
GSMUA_Achr3P24900_001	Banana	cytosol	48.47	42.13
TraesCS2D01G144500.3	Wheat	cytosol	51.53	36.44
TraesCS2B01G166100.3	Wheat	cytosol	51.53	35.97
EER99809	Sorghum	plastid	50.31	35.96
Zm00001d022347_P001	Maize	mitochondrion	50.92	35.93
TraesCS2A01G141100.2	Wheat	cytosol	51.53	35.82
Zm00001d007050_P001	Maize	mitochondrion	49.39	35.46
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	42.94	25.93
CDX80553	Canola	cytosol	25.15	24.26
CDX88210	Canola	cytosol	24.54	23.67
CDY18810	Canola	cytosol, nucleus, peroxisome	24.54	22.99
CDX72381	Canola	cytosol	22.7	22.7
CDY45023	Canola	cytosol	22.39	22.39
CDY40298	Canola	cytosol, peroxisome, plastid	24.54	22.16
CDY28276	Canola	cytosol	22.09	22.09
CDY13509	Canola	cytosol	22.09	22.09
CDY72270	Canola	cytosol	14.11	21.8
CDY05554	Canola	nucleus	24.23	21.47
CDY25013	Canola	nucleus	24.23	21.07
CDY69821	Canola	plastid	24.85	20.61
CDY19742	Canola	nucleus	23.31	20.38
CDY53338	Canola	cytosol, mitochondrion, nucleus	23.31	20.38
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	23.93	20.26
CDY46975	Canola	cytosol, mitochondrion, peroxisome	19.02	19.94
CDY50503	Canola	nucleus	21.17	19.66
CDY67911	Canola	nucleus	21.17	19.66
CDX92097	Canola	nucleus	20.55	19.09
CDX89881	Canola	plastid	24.54	18.82
CDY70364	Canola	cytosol, peroxisome	20.86	18.78
CDX91383	Canola	cytosol	18.4	18.75
CDX95903	Canola	nucleus	19.94	18.52
CDY51389	Canola	cytosol, peroxisome, plastid	23.62	18.2
CDY21964	Canola	plastid	24.23	18.0
CDY34568	Canola	cytosol	7.67	17.86
CDY48559	Canola	plastid	23.93	17.73
CDY15466	Canola	cytosol, peroxisome, plastid	23.01	17.69
CDY37649	Canola	mitochondrion, plastid	23.31	17.67
CDY56581	Canola	cytosol	18.4	17.65
CDY63003	Canola	mitochondrion, plastid	23.31	17.35
CDY05716	Canola	cytosol	57.06	17.27
CDY35922	Canola	cytosol	56.75	17.11
CDY53741	Canola	plastid	24.23	16.92
CDX92009	Canola	plastid	24.54	16.91
CDX82702	Canola	nucleus	23.31	16.89
CDY53743	Canola	plastid	24.23	16.88
CDY00978	Canola	cytosol	18.1	16.81
CDX97493	Canola	cytosol	16.56	16.27
CDX74239	Canola	plastid	24.23	16.26
CDX88554	Canola	nucleus	21.78	14.85
CDY28706	Canola	cytosol, peroxisome, plastid	23.93	14.72
CDY51537	Canola	cytosol, peroxisome, plastid	23.93	14.63
CDY33350	Canola	cytosol, nucleus, plastid	21.17	14.38
CDY35072	Canola	cytosol, peroxisome, plastid	21.17	14.32
CDX87369	Canola	nucleus	21.17	14.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078G1J6	UniProt:A0A078G1J6
EnsemblPlants:CDY18847	ProteinID:CDY18847	ProteinID:CDY18847.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00006023001	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR24353	PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EF207C
SEG:seg	:	:	:	:	:

Description

BnaAnng03120DBnaAnng03120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1J6]

Coordinates

chrLK032089:+:532647..534462

Molecular Weight (calculated)

35907.1 Da

IEP (calculated)

4.489

GRAVY (calculated)

-0.364

Length

326 amino acids

Sequence
(BLAST)

001: MGCVQCKCCR RYTPSSSSGD SHRRGGDAKV KPNVVVQKPP LSSSIQVPSP NFDMVYSVLS QRGYYPDSPD KENQDAYCIK TELQGNPNVH FFGVFDGHGV
101: FGTQCSSFVK ERVVEMLSED PALLQDPEKA YKSAFLRVNE ELHESEIDDS MSGTTAITVL VVGDKIYVAN TPFREDECER VKACGARVMT VDQVEGLKDP
201: NIQTWANEES EGGDPPRLWV QNGMYPGTAF TRSVGDCTAE GIGVTAEPEV SMVHLSPNHL FFVVASDGIF EFLPSQAVVD MVGRYADPRD GCAAATAESY
301: KLWLEHENRT DDITIIIVQI KNLSNE

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.