Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036606.1-P | Field mustard | nucleus | 98.66 | 98.66 |
| CDY19742 | Canola | nucleus | 98.66 | 98.66 |
| CDY05554 | Canola | nucleus | 90.35 | 91.58 |
| CDY25013 | Canola | nucleus | 91.69 | 91.2 |
| AT5G27930.1 | Thale cress | nucleus | 88.74 | 88.74 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 75.34 | 80.75 |
| VIT_14s0060g02070.t01 | Wine grape | mitochondrion | 68.63 | 69.95 |
| KRG96758 | Soybean | cytosol, mitochondrion, peroxisome | 69.17 | 69.92 |
| KRH68473 | Soybean | cytosol, mitochondrion, peroxisome | 68.63 | 69.0 |
| KRH33864 | Soybean | nucleus | 66.76 | 67.66 |
| Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 66.49 | 67.57 |
| PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 66.22 | 67.3 |
| GSMUA_Achr11P... | Banana | mitochondrion | 61.39 | 66.96 |
| KRG92929 | Soybean | nucleus | 65.68 | 66.76 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 62.2 | 66.29 |
| TraesCS1A01G228100.1 | Wheat | mitochondrion | 54.96 | 60.65 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 54.96 | 60.47 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 54.69 | 60.18 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 54.69 | 60.0 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 56.03 | 59.38 |
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 55.76 | 58.92 |
| Zm00001d037949_P001 | Maize | mitochondrion | 54.69 | 57.79 |
| Os05t0358500-01 | Rice | mitochondrion | 53.89 | 56.94 |
| CDY67911 | Canola | nucleus | 53.08 | 56.41 |
| CDY50503 | Canola | nucleus | 53.08 | 56.41 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 34.05 | 55.95 |
| TraesCS1D01G229600.2 | Wheat | mitochondrion | 54.96 | 55.86 |
| TraesCS1D01G229700.1 | Wheat | mitochondrion | 54.96 | 55.71 |
| TraesCS1A01G228000.1 | Wheat | mitochondrion, peroxisome, plastid | 54.69 | 54.69 |
| HORVU1Hr1G059130.3 | Barley | mitochondrion | 54.96 | 54.38 |
| TraesCS1D01G230000.2 | Wheat | cytosol, peroxisome, plastid | 53.62 | 54.35 |
| CDX95903 | Canola | nucleus | 49.6 | 52.71 |
| CDX92097 | Canola | nucleus | 49.33 | 52.42 |
| CDY72270 | Canola | cytosol | 26.01 | 45.97 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 46.65 | 45.19 |
| HORVU1Hr1G059140.2 | Barley | mitochondrion, plastid | 31.1 | 43.61 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 39.41 | 42.0 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 38.87 | 40.17 |
| CDX91383 | Canola | cytosol | 34.05 | 39.69 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 32.71 | 39.23 |
| CDX80553 | Canola | cytosol | 34.85 | 38.46 |
| CDX72381 | Canola | cytosol | 33.51 | 38.34 |
| CDY45023 | Canola | cytosol | 33.51 | 38.34 |
| CDX88210 | Canola | cytosol | 34.58 | 38.17 |
| CDY13509 | Canola | cytosol | 33.24 | 38.04 |
| CDY28276 | Canola | cytosol | 33.24 | 38.04 |
| CDY70364 | Canola | cytosol, peroxisome | 36.73 | 37.85 |
| CDY69821 | Canola | plastid | 39.68 | 37.66 |
| CDY00978 | Canola | cytosol | 33.78 | 35.9 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 36.73 | 35.58 |
| CDY37649 | Canola | mitochondrion, plastid | 40.75 | 35.35 |
| CDX92009 | Canola | plastid | 44.77 | 35.31 |
| CDY56581 | Canola | cytosol | 32.17 | 35.29 |
| CDY53741 | Canola | plastid | 43.97 | 35.12 |
| CDY53743 | Canola | plastid | 43.97 | 35.04 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 39.41 | 34.67 |
| CDX89881 | Canola | plastid | 39.41 | 34.59 |
| CDY63003 | Canola | mitochondrion, plastid | 40.48 | 34.47 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 38.87 | 34.28 |
| CDX74239 | Canola | plastid | 44.24 | 33.95 |
| CDY21964 | Canola | plastid | 39.41 | 33.49 |
| CDY48559 | Canola | plastid | 38.87 | 32.95 |
| CDX88554 | Canola | nucleus | 41.02 | 32.01 |
| CDX97493 | Canola | cytosol | 28.42 | 31.93 |
| CDX87369 | Canola | nucleus | 42.09 | 31.91 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 41.02 | 31.74 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 45.04 | 31.7 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 40.75 | 31.67 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 44.24 | 30.96 |
| CDY34568 | Canola | cytosol | 10.99 | 29.29 |
| CDY08060 | Canola | plastid | 24.4 | 25.71 |
| CDX74112 | Canola | plastid | 24.13 | 25.42 |
| CDY18847 | Canola | cytosol | 20.38 | 23.31 |
| CDX82702 | Canola | nucleus | 16.09 | 13.33 |
| CDY05716 | Canola | cytosol | 26.01 | 9.01 |
| CDY35922 | Canola | cytosol | 25.74 | 8.88 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078IWG8 | UniProt:A0A078IWG8 |
| EnsemblPlants:CDY53338 | ProteinID:CDY53338 | ProteinID:CDY53338.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00010471001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF198 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0004EE66AE | SEG:seg | : | : | : |
Description
BnaCnng24960DBnaCnng24960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWG8]
Coordinates
chrLK033190:-:20656..22620
Molecular Weight (calculated)
41421.3 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.336
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFSSMFSG FARSFSIKKV KNNNGTSDAK EAADEMARDA KKKEKILKSC GYVYADGSNN SASVFSKRGE KGVNQDCAIV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKHV RNSMPSSLLC NWQKSLAQAT LLDPELDLEG SNKKLSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT ALTIVRQGEV IYISNVGDSR
201: AVLATVSDEG SLVAVQLTLD FKPNLPQEKE RILGCKGRVF CLKDEPGVHR VWQPDAETPG LAMSRAFGDY CIKDYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVISNQE AIEIVSLTTE RPKAAKKLVE QAVRAWKKKK RGIAMDDMSV VCLFLHSSSS SLSQHVHHST TFK
101: PWGHYVAKHV RNSMPSSLLC NWQKSLAQAT LLDPELDLEG SNKKLSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT ALTIVRQGEV IYISNVGDSR
201: AVLATVSDEG SLVAVQLTLD FKPNLPQEKE RILGCKGRVF CLKDEPGVHR VWQPDAETPG LAMSRAFGDY CIKDYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVISNQE AIEIVSLTTE RPKAAKKLVE QAVRAWKKKK RGIAMDDMSV VCLFLHSSSS SLSQHVHHST TFK
001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
Arabidopsis Description
PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.