Factsheet for AT5G27930.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05554	Canola	nucleus	87.67	88.86
CDY53338	Canola	cytosol, mitochondrion, nucleus	88.74	88.74
CDY19742	Canola	nucleus	88.74	88.74
Bra036606.1-P	Field mustard	nucleus	88.74	88.74
CDY25013	Canola	nucleus	88.74	88.27
Bra020569.1-P	Field mustard	nucleus	88.74	88.27
AT3G05640.1	Thale cress	cytosol, mitochondrion, peroxisome	77.48	80.73
VIT_14s0060g02070.t01	Wine grape	mitochondrion	70.51	71.86
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	70.51	71.27
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	70.24	70.62
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	67.83	68.94
KRH33864	Soybean	nucleus	67.83	68.75
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	67.29	68.39
KRG92929	Soybean	nucleus	67.02	68.12
GSMUA_Achr11P...	Banana	mitochondrion	61.66	67.25
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	62.73	66.86
TraesCS1A01G228100.1	Wheat	mitochondrion	55.5	61.24
TraesCS1B01G242200.1	Wheat	mitochondrion	54.42	59.88
TraesCS1B01G242300.1	Wheat	mitochondrion	54.42	59.88
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	54.16	59.41
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	56.03	59.21
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	54.69	57.95
Zm00001d037949_P001	Maize	mitochondrion	54.16	57.22
Os05t0358500-01	Rice	mitochondrion	53.62	56.66
TraesCS1D01G229600.2	Wheat	mitochondrion	54.42	55.31
AT3G16800.2	Thale cress	nucleus	52.01	55.27
TraesCS1D01G229700.1	Wheat	mitochondrion	54.42	55.16
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	33.51	55.07
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	54.69	54.69
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	53.89	54.62
HORVU1Hr1G059130.3	Barley	mitochondrion	54.69	54.11
TraesCS1A01G228200.1	Wheat	mitochondrion	47.19	45.71
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	30.29	42.48
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	38.61	41.14
AT4G32950.1	Thale cress	cytosol	34.32	39.26
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	33.78	38.07
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	36.46	35.6
AT5G36250.2	Thale cress	plastid	39.95	32.25
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	38.87	31.39
AT3G02750.3	Thale cress	plastid	44.24	31.31
AT4G03415.2	Thale cress	plastid	38.87	30.98
AT1G79630.1	Thale cress	nucleus	41.82	30.95
AT1G16220.1	Thale cress	nucleus	39.95	30.35
AT3G06270.1	Thale cress	cytosol	25.2	27.01
AT2G20050.1	Thale cress	cytosol	27.61	9.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EntrezGene:832860	EMBL:AB079668
EMBL:AC007627	ProteinID:AED93745.1	ProteinID:AED93746.1	EMBL:AK118436	EMBL:AK228402	EMBL:AK229967
ArrayExpress:AT5G27930	EnsemblPlantsGene:AT5G27930	RefSeq:AT5G27930	TAIR:AT5G27930	RefSeq:AT5G27930-TAIR-G	EnsemblPlants:AT5G27930.1
TAIR:AT5G27930.1	EMBL:AY086281	EMBL:BT026463	GO:GO:0000226	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628
GO:GO:0009819	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	GO:GO:0045926	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	RefSeq:NP_568503.1
RefSeq:NP_851086.1	PFAM:PF00481	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF198	UniProt:Q0WRB2	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0000162617
SEG:seg	:	:	:	:	:

Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]

Coordinates

chr5:-:9958098..9961055

Molecular Weight (calculated)

41585.6 Da

IEP (calculated)

7.300

GRAVY (calculated)

-0.328

Length

373 amino acids

Sequence
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.