Factsheet for Bra020569.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05554	Canola	nucleus	98.13	100.0
CDY25013	Canola	nucleus	98.67	98.67
Bra036606.1-P	Field mustard	nucleus	91.2	91.69
AT5G27930.1	Thale cress	nucleus	88.27	88.74
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	75.47	81.32
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	70.4	71.54
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	69.87	70.62
VIT_14s0060g02070.t01	Wine grape	mitochondrion	67.73	69.4
KRH33864	Soybean	nucleus	66.93	68.21
KRG92929	Soybean	nucleus	66.13	67.57
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	64.53	65.94
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	64.27	65.67
GSMUA_Achr11P...	Banana	mitochondrion	59.73	65.5
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	60.53	64.86
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	55.2	60.88
TraesCS1A01G228100.1	Wheat	mitochondrion	54.4	60.35
TraesCS1B01G242200.1	Wheat	mitochondrion	54.4	60.18
TraesCS1B01G242300.1	Wheat	mitochondrion	54.13	59.88
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	55.73	59.21
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	55.2	58.81
Os05t0358500-01	Rice	mitochondrion	54.4	57.79
Zm00001d037949_P001	Maize	mitochondrion	54.4	57.79
Bra021202.1-P	Field mustard	nucleus	53.87	57.55
TraesCS1D01G229700.1	Wheat	mitochondrion	54.67	55.71
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	33.6	55.51
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	54.4	55.43
TraesCS1D01G229600.2	Wheat	mitochondrion	53.87	55.04
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	54.4	54.69
HORVU1Hr1G059130.3	Barley	mitochondrion	54.67	54.38
Bra022179.1-P	Field mustard	nucleus	50.67	54.13
TraesCS1A01G228200.1	Wheat	mitochondrion	46.93	45.71
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	30.4	42.86
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	38.4	41.14
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	38.4	39.89
Bra009875.1-P	Field mustard	cytosol	34.93	38.76
Bra037033.1-P	Field mustard	cytosol	33.33	38.34
Bra034542.1-P	Field mustard	cytosol	33.33	38.34
Bra040598.1-P	Field mustard	plastid	42.93	35.15
Bra035360.1-P	Field mustard	plastid	40.27	34.47
Bra021414.1-P	Field mustard	plastid	42.4	34.05
Bra033411.1-P	Field mustard	mitochondrion	37.87	33.57
Bra001060.1-P	Field mustard	plastid	42.4	33.33
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	38.67	32.44
Bra034206.1-P	Field mustard	plastid	39.47	31.83
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	40.53	31.54
Bra035131.1-P	Field mustard	nucleus	40.0	30.8
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	10.67	27.4
Bra001189.1-P	Field mustard	plastid	24.8	26.27
Bra040230.1-P	Field mustard	cytosol	21.07	24.23
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.47	20.29
Bra040822.1-P	Field mustard	cytosol	25.07	9.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra020569	EnsemblPlants:Bra020569.1
EnsemblPlants:Bra020569.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4DVM5	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF198	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002546AB4
SEG:seg	:	:	:	:	:

Description

AT5G27930 (E=3e-183) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA02:-:24500212..24502312

Molecular Weight (calculated)

41635.6 Da

IEP (calculated)

8.071

GRAVY (calculated)

-0.341

Length

375 amino acids

Sequence
(BLAST)

001: MGHFSSMFSG LARSFSIKKV KNNNGTCDAK QAADEMVKDA KKKEMILKSC GYVYAEGSNN SASVFSKRGQ KGVNQDCAIV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKHV RNSMPSSLLC NWQKTLAQTA LLEPELDLEG SNKKFSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT AITIVRQGDV IYVSNVGDSR
201: AVLATTSDEG SLVAVQLTLD FKPNLPQEKE RIIGCNGRVF CMKDEPGVHR VWQPDTEAPG LAMSRAFGDY CIKEYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVITNQE AIEIVSSTAE RPKAAKRLVE QAVRAWKKKR RGIAMDDMSV VCLFLHSSSS SPSLSQHVQH ATTFK

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.