Factsheet for Bra040598.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021414.1-P	Field mustard	plastid	89.08	87.37
CDY51537	Canola	cytosol, peroxisome, plastid	95.63	82.18
Bra001060.1-P	Field mustard	plastid	84.5	81.13
CDY28706	Canola	cytosol, peroxisome, plastid	92.79	80.19
AT3G02750.3	Thale cress	plastid	87.77	76.28
VIT_04s0023g00690.t01	Wine grape	plastid	69.43	65.43
Solyc04g056560.2.1	Tomato	cytosol	55.46	63.34
PGSC0003DMT400027278	Potato	cytosol	55.9	62.75
PGSC0003DMT400060345	Potato	plastid	62.45	60.85
Solyc05g055790.2.1	Tomato	plastid	61.14	59.57
Bra035360.1-P	Field mustard	plastid	56.33	58.9
KRH45219	Soybean	vacuole	12.01	57.89
Bra033411.1-P	Field mustard	mitochondrion	46.29	50.12
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.72	49.32
Bra035131.1-P	Field mustard	nucleus	51.09	48.05
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	37.77	47.92
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	46.29	47.43
Bra034206.1-P	Field mustard	plastid	48.03	47.31
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	49.56	47.1
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	34.06	44.83
Bra036606.1-P	Field mustard	nucleus	36.24	44.5
Bra020569.1-P	Field mustard	nucleus	35.15	42.93
Bra022179.1-P	Field mustard	nucleus	32.53	42.45
Bra034542.1-P	Field mustard	cytosol	30.13	42.33
Bra021202.1-P	Field mustard	nucleus	31.88	41.6
Bra009875.1-P	Field mustard	cytosol	30.35	41.12
Bra037033.1-P	Field mustard	cytosol	28.6	40.18
Bra001189.1-P	Field mustard	plastid	19.21	24.86
Bra040230.1-P	Field mustard	cytosol	17.25	24.23
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.21	23.91
Bra040822.1-P	Field mustard	cytosol	26.42	12.53

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra040598	EnsemblPlants:Bra040598.1
EnsemblPlants:Bra040598.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4FHM0	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002547570
SEG:seg	:	:	:	:	:

Description

AT1G03590 (E=1e-111) | catalytic/ protein serine/threonine phosphatase

Coordinates

chrA05:+:23567018..23568710

Molecular Weight (calculated)

49944.8 Da

IEP (calculated)

5.282

GRAVY (calculated)

-0.353

Length

458 amino acids

Sequence
(BLAST)

001: MGSCLSAETR SPTPGSPCSP GFGVKKRKNS KKRLGSRNSS FDSRRDDPLH RVPGRMYLNG ASEAACIFTQ QGKKGPNQDA MVVWENFGSR TDTVFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAIVP INSASNINNS EDASFVSAEE EPSANNNSEE SQSDLFQTLK DAFLKAFKVM DRELKFHKSV DCFCSGTTAV
201: TLIKQGEYLV VGNVGDSRAV MGTRNGENAL VAVQLTVDLK PNLPAEAERI KKCRGRVFAL RDEPEVCRVW LPNCDSPGLA MARAFGDFCL KDFGLISVPD
301: VSFRRLTEQD EFIVLASDGI WDVLSNEEVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLHSNDTNV ISSASSISKL EDDDDASEPS
401: GLGRSSTVRT GKEIALDESE AEKLIKEEDI EPGTEYSALE GVARVNTLLN LPRFVPGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.