Factsheet for Bra033411.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89881	Canola	plastid	94.09	93.65
CDY69821	Canola	plastid	83.92	90.33
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	85.58	80.98
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	84.87	77.71
Bra034206.1-P	Field mustard	plastid	77.54	70.54
VIT_12s0059g01820.t01	Wine grape	plastid	73.29	65.54
KRH56012	Soybean	nucleus	72.81	65.39
KRH22416	Soybean	nucleus, plastid	73.29	65.26
KRH25524	Soybean	nucleus	72.58	65.18
PGSC0003DMT400047180	Potato	plastid	72.34	64.83
KRH26917	Soybean	cytosol, plastid	72.58	64.77
Solyc07g054300.2.1	Tomato	plastid	71.39	63.98
PGSC0003DMT400055813	Potato	plastid	69.98	62.98
Solyc10g008490.2.1	Tomato	plastid	69.74	62.9
EER99559	Sorghum	plastid	57.68	56.61
Os07t0566200-01	Rice	plasma membrane	56.97	56.44
Zm00001d006614_P001	Maize	plastid	57.45	56.25
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	56.97	55.92
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	56.5	55.84
Zm00001d021817_P001	Maize	plastid	56.74	55.68
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	56.74	55.68
GSMUA_Achr9P24510_001	Banana	plastid	55.08	55.48
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	56.26	55.22
HORVU2Hr1G084080.1	Barley	cytosol, plastid	18.44	50.0
Bra040598.1-P	Field mustard	plastid	50.12	46.29
Bra021414.1-P	Field mustard	plastid	50.35	45.61
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	37.83	44.32
Bra001060.1-P	Field mustard	plastid	49.65	44.03
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	49.17	43.15
Bra035131.1-P	Field mustard	nucleus	48.7	42.3
Bra035360.1-P	Field mustard	plastid	43.74	42.24
Bra009875.1-P	Field mustard	cytosol	32.39	40.53
Bra034542.1-P	Field mustard	cytosol	31.21	40.49
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	13.95	40.41
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	32.62	39.66
Bra037033.1-P	Field mustard	cytosol	30.5	39.57
Bra036606.1-P	Field mustard	nucleus	34.52	39.14
Bra020569.1-P	Field mustard	nucleus	33.57	37.87
Bra022179.1-P	Field mustard	nucleus	30.73	37.04
Bra021202.1-P	Field mustard	nucleus	30.73	37.04
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	8.04	24.64
Bra001189.1-P	Field mustard	plastid	20.57	24.58
Bra040230.1-P	Field mustard	cytosol	18.44	23.93
Bra040822.1-P	Field mustard	cytosol	29.08	12.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra033411	EnsemblPlants:Bra033411.1
EnsemblPlants:Bra033411.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:IPR001932	InterPro:IPR036457	UniProt:M4EX75	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000254483A	SEG:seg	:	:	:	:

Description

AT1G03590 (E=3e-175) | catalytic/ protein serine/threonine phosphatase

Coordinates

chrA10:+:3807361..3808951

Molecular Weight (calculated)

46814.8 Da

IEP (calculated)

4.882

GRAVY (calculated)

-0.503

Length

423 amino acids

Sequence
(BLAST)

001: MGRRTSSGRI VSLNNLVSIP NRITSNGKSK SSCIFTQQGR KGVNQDSMIV WEDFMSKDVT FCGVFDGHGP HGHLVSRKVR ESLPVRLLSF VQSKQNGTSK
101: SDSQEAAAKE KEEKEEASEE DKLKLLWEEA FLKAFSAMDK ELRSHPNVEC FCSGSTAVTV IKQGSNLFMG NIGDSRAILG SKDSNDSMVA TQLTVDLKPD
201: LPREAERIKQ CKGRVFALED EPEVPRVWLP YDNAPGLAMA RAFGDFCLKD YGVISVPEFS HRVLTDRDQF IVLASDGVWD VLSNEEVVEV VASAPRRASA
301: ARLVVDSAAR EWKLKYPTSK MDDCAVVCLF LDGKMDSDSS DYEEQGYYSS ATNAVEESEE SQVNAEPCLQ RNVTVRASTE YGNVNAEKEK KSEGEQNWSG
401: LEGVTRVNSL VQLPRFSGEE TKT

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.