Factsheet for Bra036606.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19742	Canola	nucleus	99.46	99.46
CDY53338	Canola	cytosol, mitochondrion, nucleus	98.66	98.66
Bra020569.1-P	Field mustard	nucleus	91.69	91.2
AT5G27930.1	Thale cress	nucleus	88.74	88.74
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	75.6	81.03
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	70.24	71.0
VIT_14s0060g02070.t01	Wine grape	mitochondrion	69.44	70.77
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	69.71	70.08
KRH33864	Soybean	nucleus	67.56	68.48
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	66.76	67.85
GSMUA_Achr11P...	Banana	mitochondrion	62.2	67.84
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	66.49	67.57
KRG92929	Soybean	nucleus	66.49	67.57
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	63.0	67.14
TraesCS1A01G228100.1	Wheat	mitochondrion	55.76	61.54
TraesCS1B01G242300.1	Wheat	mitochondrion	55.76	61.36
TraesCS1B01G242200.1	Wheat	mitochondrion	55.5	61.06
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	55.5	60.88
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	56.84	60.23
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	56.57	59.77
Zm00001d037949_P001	Maize	mitochondrion	55.5	58.64
Os05t0358500-01	Rice	mitochondrion	54.69	57.79
Bra021202.1-P	Field mustard	nucleus	53.62	56.98
TraesCS1D01G229700.1	Wheat	mitochondrion	55.76	56.52
TraesCS1D01G229600.2	Wheat	mitochondrion	55.5	56.4
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	34.32	56.39
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	55.5	55.5
HORVU1Hr1G059130.3	Barley	mitochondrion	55.76	55.17
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	54.42	55.16
Bra022179.1-P	Field mustard	nucleus	50.67	53.85
TraesCS1A01G228200.1	Wheat	mitochondrion	47.19	45.71
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	31.37	43.98
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	39.14	41.71
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	39.41	40.72
Bra009875.1-P	Field mustard	cytosol	34.85	38.46
Bra034542.1-P	Field mustard	cytosol	33.51	38.34
Bra037033.1-P	Field mustard	cytosol	32.98	37.73
Bra040598.1-P	Field mustard	plastid	44.5	36.24
Bra021414.1-P	Field mustard	plastid	44.24	35.33
Bra035360.1-P	Field mustard	plastid	40.75	34.7
Bra001060.1-P	Field mustard	plastid	44.24	34.59
Bra033411.1-P	Field mustard	mitochondrion	39.14	34.52
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	39.95	33.33
Bra034206.1-P	Field mustard	plastid	39.95	32.04
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	41.29	31.95
Bra035131.1-P	Field mustard	nucleus	41.29	31.62
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	10.72	27.4
Bra001189.1-P	Field mustard	plastid	24.4	25.71
Bra040230.1-P	Field mustard	cytosol	20.64	23.62
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.77	21.01
Bra040822.1-P	Field mustard	cytosol	26.01	10.04

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra036606	EnsemblPlants:Bra036606.1
EnsemblPlants:Bra036606.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4F697	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF198	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002541D6F
SEG:seg	:	:	:	:	:

Description

AT5G27930 (E=3e-182) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA09:+:1976365..1978221

Molecular Weight (calculated)

41479.3 Da

IEP (calculated)

8.114

GRAVY (calculated)

-0.349

Length

373 amino acids

Sequence
(BLAST)

001: MGYFSSMFSG FARSFSIKKV KNNNGTSDAK EAADEMARDA KKKEKILKSC GYVYADGSNN SASVFSKRGE KGVNQDCAIV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKHV RNSMPSSLLC NWQKSLAQAT LLDPEIDLEG SNKKLSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT ALTIVRQGEV IYISNVGDSR
201: AVLATVSDEG SLVAVQLTLD FKPNLPQEKE RILGCKGRVF CLKDEPGVHR VWQPDAETPG LAMSRAFGDY CIKDYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVISNQE AVEIVSLTTE RPKAAKRLVE QAVRAWKKKR RGIAMDDMSV VCLFLHSSSS SLSQHVHHST TFK

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.