Factsheet for Solyc01g100040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g121800.2.1
Solyc12g044910.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05640.1	Solyc03g121800.2.1	AT4G08520.1	21798944
AT3G05640.1	Solyc12g044910.1.1	AT4G08520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	98.09	98.09
VIT_14s0060g02070.t01	Wine grape	mitochondrion	77.11	77.32
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	73.84	73.05
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	73.3	72.9
KRH33864	Soybean	nucleus	72.21	72.01
AT3G05640.1	Thale cress	cytosol, mitochondrion, peroxisome	69.75	71.51
KRG92929	Soybean	nucleus	71.39	71.39
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	67.3	70.98
CDY18810	Canola	cytosol, nucleus, peroxisome	67.3	70.98
GSMUA_Achr11P...	Banana	mitochondrion	65.4	70.18
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	66.21	69.43
AT5G27930.1	Thale cress	nucleus	68.39	67.29
Bra036606.1-P	Field mustard	nucleus	67.85	66.76
CDY53338	Canola	cytosol, mitochondrion, nucleus	67.57	66.49
CDY19742	Canola	nucleus	67.3	66.22
CDY05554	Canola	nucleus	64.85	64.67
Bra020569.1-P	Field mustard	nucleus	65.67	64.27
CDY25013	Canola	nucleus	65.12	63.73
TraesCS1A01G228100.1	Wheat	mitochondrion	58.31	63.31
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	58.31	62.94
TraesCS1B01G242300.1	Wheat	mitochondrion	57.77	62.54
TraesCS1B01G242200.1	Wheat	mitochondrion	57.77	62.54
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	59.4	61.93
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	58.86	61.19
Zm00001d037949_P001	Maize	mitochondrion	58.31	60.62
TraesCS1D01G229600.2	Wheat	mitochondrion	58.58	58.58
TraesCS1D01G229700.1	Wheat	mitochondrion	58.31	58.15
Os05t0358500-01	Rice	mitochondrion	55.86	58.07
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	57.77	57.61
HORVU1Hr1G059130.3	Barley	mitochondrion	59.13	57.56
Solyc01g065700.2.1	Tomato	nucleus	56.13	57.06
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	57.77	56.84
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	34.33	55.51
TraesCS1A01G228200.1	Wheat	mitochondrion	49.32	47.01
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	42.78	44.86
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	31.61	43.61
Solyc08g065670.2.1	Tomato	peroxisome	35.97	43.14
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	37.06	40.48
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	36.51	40.36
Solyc04g056560.2.1	Tomato	cytosol	41.42	37.91
Solyc05g055790.2.1	Tomato	plastid	46.59	36.38
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	19.35	34.63
Solyc10g076320.1.1	Tomato	nucleus	39.78	33.49
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	45.23	32.23
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	39.78	32.23
Solyc07g054300.2.1	Tomato	plastid	40.33	31.36
Solyc10g008490.2.1	Tomato	plastid	40.05	31.34
Solyc10g005640.2.1	Tomato	nucleus	44.41	29.32
Solyc01g080400.2.1	Tomato	cytosol	25.61	22.71
Solyc05g018300.2.1	Tomato	cytosol	26.98	9.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4B138	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF198
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc01g100040.2	EnsemblPlants:Solyc01g100040.2.1	UniParc:UPI000276913A	:

Description

No Description!

Coordinates

chr1:-:90111512..90114588

Molecular Weight (calculated)

40921.6 Da

IEP (calculated)

6.664

GRAVY (calculated)

-0.258

Length

367 amino acids

Sequence
(BLAST)

001: MGHFSSMFNG LARSFSLKKR KNSSGNGKYD GRDAVEAMAK EAKRNDLILR SSGTVNVDGS KNFASLFSRR GEKGVNQDCF IVWEEFGCQE DMTFCGIFDG
101: HGPWGHFVSK KVRESIVSSL LCLWQESLAE ASADPDLDKK AQRFNIWKES FLKACATVDQ ELEHHPKIDT FYSGTTALTI VRQGEVLFIA NVGDSRAVLA
201: TTCDDGNLVP VQLTVDFKPN LPQETERILQ CNGRVFCLDD ESGVHRLWLP DESSPGLAMS RAFGDYCVKD FGLISVPDVT QRHITSKDQF VVLATDGVWD
301: VISNEEAVEI VSETPDRAKA AKHLVQCAVR AWKRKRRGIA VDDISAIVLF FLSKHFCQHI YPVTTPK

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.