Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G168700.2 | |
| TraesCS5B01G165500.2 | |
| TraesCS5D01G173000.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G05640.1 | TraesCS5A01G168700.2 | AT4G08520.1 | 21798944 |
| AT3G05640.1 | TraesCS5B01G165500.2 | AT4G08520.1 | 21798944 |
| AT3G05640.1 | TraesCS5D01G173000.1 | AT4G08520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 86.34 | 57.65 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 84.14 | 54.26 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 88.55 | 52.21 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 75.77 | 50.74 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 75.33 | 50.44 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 74.01 | 48.0 |
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 74.01 | 47.59 |
| Zm00001d037949_P001 | Maize | mitochondrion | 70.93 | 45.61 |
| Os05t0358500-01 | Rice | mitochondrion | 69.6 | 44.76 |
| GSMUA_Achr11P... | Banana | mitochondrion | 64.32 | 42.69 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 61.67 | 40.0 |
| VIT_14s0060g02070.t01 | Wine grape | mitochondrion | 60.35 | 37.43 |
| KRG96758 | Soybean | cytosol, mitochondrion, peroxisome | 59.91 | 36.86 |
| KRH68473 | Soybean | cytosol, mitochondrion, peroxisome | 59.91 | 36.66 |
| Bra040530.1-P | Field mustard | cytosol, nucleus, peroxisome | 55.07 | 35.92 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 55.07 | 35.92 |
| KRH33864 | Soybean | nucleus | 57.71 | 35.6 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 55.51 | 35.2 |
| KRG92929 | Soybean | nucleus | 56.83 | 35.15 |
| Solyc01g065700.2.1 | Tomato | nucleus | 55.07 | 34.63 |
| PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 55.95 | 34.6 |
| PGSC0003DMT400015950 | Potato | plastid | 54.19 | 34.36 |
| Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 55.51 | 34.33 |
| Bra036606.1-P | Field mustard | nucleus | 56.39 | 34.32 |
| CDY05554 | Canola | nucleus | 55.51 | 34.24 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 55.95 | 34.05 |
| CDY19742 | Canola | nucleus | 55.95 | 34.05 |
| KRH50799 | Soybean | cytosol | 54.63 | 33.79 |
| AT3G16800.2 | Thale cress | nucleus | 51.98 | 33.62 |
| Bra020569.1-P | Field mustard | nucleus | 55.51 | 33.6 |
| AT5G27930.1 | Thale cress | nucleus | 55.07 | 33.51 |
| CDY25013 | Canola | nucleus | 54.63 | 33.07 |
| KRH02293 | Soybean | cytosol | 54.63 | 32.98 |
| CDY50503 | Canola | nucleus | 50.66 | 32.76 |
| CDY67911 | Canola | nucleus | 50.66 | 32.76 |
| Bra021202.1-P | Field mustard | nucleus | 50.66 | 32.76 |
| Bra022179.1-P | Field mustard | nucleus | 50.22 | 32.48 |
| VIT_05s0077g01820.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 57.27 | 32.34 |
| CDX95903 | Canola | nucleus | 49.78 | 32.19 |
| CDX92097 | Canola | nucleus | 49.78 | 32.19 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 44.05 | 28.01 |
| TraesCS2B01G229000.1 | Wheat | cytosol, peroxisome, plastid | 44.49 | 23.43 |
| TraesCS4B01G162100.1 | Wheat | cytosol, mitochondrion, peroxisome | 44.05 | 22.83 |
| TraesCS5B01G149300.1 | Wheat | cytosol | 41.41 | 22.01 |
| TraesCS7B01G137400.2 | Wheat | plastid | 48.02 | 18.96 |
| TraesCS6B01G229600.1 | Wheat | mitochondrion | 42.73 | 18.73 |
| TraesCS2B01G291800.1 | Wheat | mitochondrion | 43.17 | 18.53 |
| TraesCS2B01G166100.3 | Wheat | cytosol | 29.07 | 14.13 |
| TraesCS6B01G231400.1 | Wheat | plastid | 27.31 | 5.71 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF198 | SMART:SM00332 |
| SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS1B01G033400 | EnsemblPlants:TraesCS1B01G033400.1 | TIGR:cd00143 | : | : |
Description
No Description!
Coordinates
chr1B:+:16228502..16229271
Molecular Weight (calculated)
25272.9 Da
IEP (calculated)
4.957
GRAVY (calculated)
-0.259
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: QGYGCQDDTI FCDVLDGHDQ WGHYAAKAVR ESLPQSLQCR WQEAVALVSL IDGEKRLSNC QFDLLRQSYL AAAAAVDEEL RSLRLDAVNS GCTALSMVKQ
101: GDLMVVANIG DSRAVRATTS DDGDVTTVQL TVDFKPDLPQ EKTRIMQCEG RVHCLDDEPG VHRVWMPHRE APGLAMLRAF GDYCIKDYDV ISAPEVTQRR
201: ITARDQFVIL ATDGVSDRFS HSHKVFL
101: GDLMVVANIG DSRAVRATTS DDGDVTTVQL TVDFKPDLPQ EKTRIMQCEG RVHCLDDEPG VHRVWMPHRE APGLAMLRAF GDYCIKDYDV ISAPEVTQRR
201: ITARDQFVIL ATDGVSDRFS HSHKVFL
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Arabidopsis Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.