Factsheet for PGSC0003DMT400015950

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g065700.2.1	Tomato	nucleus	95.25	94.46
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	58.38	59.71
GSMUA_Achr11P...	Banana	mitochondrion	56.98	59.65
KRH50799	Soybean	cytosol	58.94	57.49
KRH02293	Soybean	cytosol	59.22	56.38
TraesCS1A01G228100.1	Wheat	mitochondrion	53.07	56.21
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	57.54	56.13
VIT_05s0077g01820.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	62.85	55.97
CDY50503	Canola	nucleus	54.75	55.84
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	52.79	55.59
Bra021202.1-P	Field mustard	nucleus	54.47	55.56
CDY67911	Canola	nucleus	54.47	55.56
TraesCS1B01G242300.1	Wheat	mitochondrion	51.96	54.87
AT3G16800.2	Thale cress	nucleus	53.63	54.7
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	34.36	54.19
TraesCS1B01G242200.1	Wheat	mitochondrion	51.12	53.98
Bra022179.1-P	Field mustard	nucleus	52.51	53.56
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	52.51	53.26
CDX95903	Canola	nucleus	51.96	52.99
Os05t0358500-01	Rice	mitochondrion	52.23	52.97
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	51.96	52.84
CDX92097	Canola	nucleus	51.4	52.42
Zm00001d037949_P001	Maize	mitochondrion	51.68	52.41
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	52.51	51.09
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	52.51	50.4
TraesCS1D01G229700.1	Wheat	mitochondrion	51.4	50.0
TraesCS1D01G229600.2	Wheat	mitochondrion	50.56	49.32
HORVU1Hr1G059130.3	Barley	mitochondrion	51.12	48.54
PGSC0003DMT400005637	Potato	cytosol	24.58	45.13
TraesCS1A01G228200.1	Wheat	mitochondrion	44.69	41.56
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	29.33	39.47
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	36.31	37.14
PGSC0003DMT400027278	Potato	cytosol	39.39	34.56
PGSC0003DMT400030965	Potato	nucleus	41.34	33.26
PGSC0003DMT400060345	Potato	plastid	43.58	33.19
PGSC0003DMT400028836	Potato	nucleus	40.22	31.86
PGSC0003DMT400055813	Potato	plastid	39.39	30.0
PGSC0003DMT400047180	Potato	plastid	39.39	29.87
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	41.9	29.13
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	41.62	26.99
PGSC0003DMT400081764	Potato	cytosol	25.42	21.98

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102598860	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0000226
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009628	GO:GO:0009819	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0019538	GO:GO:0040007	GO:GO:0045926	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1A6V8
PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400006242	PGSC:PGSC0003DMG400006242	EnsemblPlants:PGSC0003DMT400015950	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF310	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00029678E8	RefSeq:XP_006354291.1	RefSeq:XP_015167246.1	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400006242]

Coordinates

chr1:+:11429508..11433445

Molecular Weight (calculated)

40079.7 Da

IEP (calculated)

6.185

GRAVY (calculated)

-0.317

Length

358 amino acids

Sequence
(BLAST)

001: MVQFSSIFTG FTKSIAIRNG KKSKHDDGRE TADSLAKEAK KNEMMLTSSG SVAGNLAVVF SKGGKKGINQ DRFVVWEDFG CQDDMIFCGV FDGHGPWGHL
101: VAKRVRKLMP PALLRNWQKR VSHTVDGTDG ISIDRSCFQF DIWKHSYFET CSIIDQELEQ YADSFYSGTT ALTLVRQGDL LVVANVGDSR AVLATTDDDG
201: RLVSVQLTVD LKPNLPRESE RIMQSRGRVL SCEDEPGVYR MWMPTVEGPG LAISRAFGDY YIKDFGLISE PELTSRNITH RDQFAILATD GVWDVMSNEE
301: AVEIVFSTEE REDAAKRLVE SAICAWKRKR RGVPMDDISA ICLFFHNIPP SKQQAKNV

Best Arabidopsis Sequence Match ( AT3G05640.3 )
(BLAST)

001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL

Arabidopsis Description

Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.