Factsheet for PGSC0003DMT400060345

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g055790.2.1	Tomato	plastid	94.89	94.89
PGSC0003DMT400027278	Potato	cytosol	65.11	75.0
VIT_04s0023g00690.t01	Wine grape	plastid	71.06	68.72
KRH00931	Soybean	plastid	65.74	63.45
Bra021414.1-P	Field mustard	plastid	62.98	63.38
KRH40292	Soybean	plastid	65.53	62.99
CDY53743	Canola	plastid	62.34	62.61
CDY53741	Canola	plastid	62.13	62.53
Bra040598.1-P	Field mustard	plastid	60.85	62.45
CDX92009	Canola	plastid	59.57	59.2
CDX74239	Canola	plastid	60.43	58.44
Bra001060.1-P	Field mustard	plastid	59.15	58.28
AT3G02750.3	Thale cress	plastid	64.26	57.31
CDY28706	Canola	cytosol, peroxisome, plastid	60.64	53.77
PGSC0003DMT400005637	Potato	cytosol	22.13	53.33
CDY51537	Canola	cytosol, peroxisome, plastid	60.0	52.91
PGSC0003DMT400055813	Potato	plastid	47.66	47.66
PGSC0003DMT400047180	Potato	plastid	46.81	46.61
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	36.38	46.59
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	47.87	43.69
PGSC0003DMT400030965	Potato	nucleus	41.28	43.6
PGSC0003DMT400015950	Potato	plastid	33.19	43.58
PGSC0003DMT400028836	Potato	nucleus	38.72	40.27
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	47.02	40.04
PGSC0003DMT400081764	Potato	cytosol	21.28	24.15

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102594092	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1C5P0
PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400023473	PGSC:PGSC0003DMG400023473	EnsemblPlants:PGSC0003DMT400060345	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000294D299	RefSeq:XP_006345821.1	SEG:seg	:	:	:

Description

Protein phosphatase-2c [Source:PGSC_GENE;Acc:PGSC0003DMG400023473]

Coordinates

chr5:+:51399597..51404357

Molecular Weight (calculated)

51736.6 Da

IEP (calculated)

4.977

GRAVY (calculated)

-0.429

Length

470 amino acids

Sequence
(BLAST)

001: MGSCLSSDSR SPHPGSPASA IKKRKNSKKR SGSRNSSFDF HKEELLHRVP GRMFLNGSSE VASLFSQQGK KGTNQDAMIV WENFGSREDT VFCGVFDGHG
101: PFGHMVAKRV RDALPLKLST HWEVNIKSED VLREISLNTG SSLYPEDAVL ISAEESRLSI DVEETEKHLE VFQTLKESFL KAYKVMDREL RSYTNIDCFC
201: SGTTSVTLVK QGENLVIGNV GDSRAVLGTR GEDDSLTAVQ LTVDLKPDLP AEFERIRKCK GRVFSLQDEP DVARVWMPNS NSPGLAMARA FGDFCLKDFG
301: VISVPEISYR RLSEKDEFIV LATDGIWDVL SNDEVVNIVD SASSRSSAAR SLVEEAVRAW KITYPTSKVD DCAVVCLFLD SNSNNFSTAS STEDNDKTFV
401: SMEMSEVSNN KGGALSPPAL NRSCTVREGE EVSTVSNEEA SEQDELLPKT EKEWSALDGV AVGGSKYKKK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.