Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc04g056560.2.1 | Tomato | cytosol | 95.59 | 97.26 |
PGSC0003DMT400060345 | Potato | plastid | 75.0 | 65.11 |
VIT_04s0023g00690.t01 | Wine grape | plastid | 75.25 | 63.17 |
KRH40292 | Soybean | plastid | 69.12 | 57.67 |
KRH00931 | Soybean | plastid | 68.63 | 57.49 |
Bra021414.1-P | Field mustard | plastid | 65.44 | 57.17 |
CDY53743 | Canola | plastid | 64.95 | 56.62 |
CDY53741 | Canola | plastid | 64.46 | 56.32 |
PGSC0003DMT400005637 | Potato | cytosol | 26.72 | 55.9 |
Bra040598.1-P | Field mustard | plastid | 62.75 | 55.9 |
Bra001060.1-P | Field mustard | plastid | 63.73 | 54.51 |
CDX92009 | Canola | plastid | 62.25 | 53.7 |
CDX74239 | Canola | plastid | 63.48 | 53.29 |
AT3G02750.3 | Thale cress | plastid | 67.89 | 52.56 |
CDY28706 | Canola | cytosol, peroxisome, plastid | 62.25 | 47.92 |
CDY51537 | Canola | cytosol, peroxisome, plastid | 61.52 | 47.09 |
PGSC0003DMT400055813 | Potato | plastid | 49.02 | 42.55 |
PGSC0003DMT400047180 | Potato | plastid | 49.02 | 42.37 |
PGSC0003DMT400056929 | Potato | cytosol, nucleus, peroxisome | 53.19 | 42.14 |
PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 37.25 | 41.42 |
PGSC0003DMT400030965 | Potato | nucleus | 44.36 | 40.67 |
PGSC0003DMT400015950 | Potato | plastid | 34.56 | 39.39 |
PGSC0003DMT400029340 | Potato | cytosol, nucleus, peroxisome | 51.72 | 38.22 |
PGSC0003DMT400028836 | Potato | nucleus | 40.2 | 36.28 |
PGSC0003DMT400081764 | Potato | cytosol | 20.83 | 20.53 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:M1APG1 | PFAM:PF00481 |
EnsemblPlantsGene:PGSC0003DMG400010520 | PGSC:PGSC0003DMG400010520 | EnsemblPlants:PGSC0003DMT400027278 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF510 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000294F658 |
SEG:seg | : | : | : | : | : |
Description
Protein phosphatase-2c [Source:PGSC_GENE;Acc:PGSC0003DMG400010520]
Coordinates
chr4:-:49665365..49673398
Molecular Weight (calculated)
44583.2 Da
IEP (calculated)
4.558
GRAVY (calculated)
-0.296
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVWENFGSR TDTVFCGVFD GHGPHGHMVA KRVRDSLPSK LSAHWEVNLK SEDVLKEISL NAGASLYPED ASLISAADES RVSIDVEETG KHPEIFQTLK
101: ESFLKAYKVM DRELKSYTNI DCFCSGTTAV TLIKQGQDLV IGNVGDSRAI LGTRDKDGSL TAVQLTVDLK PNLPAEAERI RKCRGRVFSL RDEPEVARVW
201: LPNSDSPGLA MARAFGDFCL KDFGLISVPE ISYRRLTGKD EFIVLATDGI WDVLTNDEVV KIVASASSHS SAARSLVESA VRAWRTKYPT SKVDDCAVVC
301: LFLDSNSNNL STASNTKDSD KTVSMKANEV GAKIDDTSGP TAFPRSGTVR EVEVSGEGDD VSEEEIEEAS EHEELLSEVG AEWSALEGVS RLNTLLTLPR
401: FVPDKDEN
101: ESFLKAYKVM DRELKSYTNI DCFCSGTTAV TLIKQGQDLV IGNVGDSRAI LGTRDKDGSL TAVQLTVDLK PNLPAEAERI RKCRGRVFSL RDEPEVARVW
201: LPNSDSPGLA MARAFGDFCL KDFGLISVPE ISYRRLTGKD EFIVLATDGI WDVLTNDEVV KIVASASSHS SAARSLVESA VRAWRTKYPT SKVDDCAVVC
301: LFLDSNSNNL STASNTKDSD KTVSMKANEV GAKIDDTSGP TAFPRSGTVR EVEVSGEGDD VSEEEIEEAS EHEELLSEVG AEWSALEGVS RLNTLLTLPR
401: FVPDKDEN
001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.