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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g056560.2.1 Tomato cytosol 95.59 97.26
PGSC0003DMT400060345 Potato plastid 75.0 65.11
VIT_04s0023g00690.t01 Wine grape plastid 75.25 63.17
KRH40292 Soybean plastid 69.12 57.67
KRH00931 Soybean plastid 68.63 57.49
Bra021414.1-P Field mustard plastid 65.44 57.17
CDY53743 Canola plastid 64.95 56.62
CDY53741 Canola plastid 64.46 56.32
PGSC0003DMT400005637 Potato cytosol 26.72 55.9
Bra040598.1-P Field mustard plastid 62.75 55.9
Bra001060.1-P Field mustard plastid 63.73 54.51
CDX92009 Canola plastid 62.25 53.7
CDX74239 Canola plastid 63.48 53.29
AT3G02750.3 Thale cress plastid 67.89 52.56
CDY28706 Canola cytosol, peroxisome, plastid 62.25 47.92
CDY51537 Canola cytosol, peroxisome, plastid 61.52 47.09
PGSC0003DMT400055813 Potato plastid 49.02 42.55
PGSC0003DMT400047180 Potato plastid 49.02 42.37
PGSC0003DMT400056929 Potato cytosol, nucleus, peroxisome 53.19 42.14
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 37.25 41.42
PGSC0003DMT400030965 Potato nucleus 44.36 40.67
PGSC0003DMT400015950 Potato plastid 34.56 39.39
PGSC0003DMT400029340 Potato cytosol, nucleus, peroxisome 51.72 38.22
PGSC0003DMT400028836 Potato nucleus 40.2 36.28
PGSC0003DMT400081764 Potato cytosol 20.83 20.53
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004722GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:IPR001932InterPro:IPR036457UniProt:M1APG1PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400010520PGSC:PGSC0003DMG400010520EnsemblPlants:PGSC0003DMT400027278InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_dom
PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF510SMART:SM00332SUPFAM:SSF81606UniParc:UPI000294F658
SEG:seg:::::
Description
Protein phosphatase-2c [Source:PGSC_GENE;Acc:PGSC0003DMG400010520]
Coordinates
chr4:-:49665365..49673398
Molecular Weight (calculated)
44583.2 Da
IEP (calculated)
4.558
GRAVY (calculated)
-0.296
Length
408 amino acids
Sequence
(BLAST)
001: MIVWENFGSR TDTVFCGVFD GHGPHGHMVA KRVRDSLPSK LSAHWEVNLK SEDVLKEISL NAGASLYPED ASLISAADES RVSIDVEETG KHPEIFQTLK
101: ESFLKAYKVM DRELKSYTNI DCFCSGTTAV TLIKQGQDLV IGNVGDSRAI LGTRDKDGSL TAVQLTVDLK PNLPAEAERI RKCRGRVFSL RDEPEVARVW
201: LPNSDSPGLA MARAFGDFCL KDFGLISVPE ISYRRLTGKD EFIVLATDGI WDVLTNDEVV KIVASASSHS SAARSLVESA VRAWRTKYPT SKVDDCAVVC
301: LFLDSNSNNL STASNTKDSD KTVSMKANEV GAKIDDTSGP TAFPRSGTVR EVEVSGEGDD VSEEEIEEAS EHEELLSEVG AEWSALEGVS RLNTLLTLPR
401: FVPDKDEN
Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)
001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.