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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021414.1-P Field mustard plastid 78.18 88.22
Bra040598.1-P Field mustard plastid 76.28 87.77
CDY53743 Canola plastid 77.8 87.61
CDY53741 Canola plastid 77.04 86.94
CDX92009 Canola plastid 75.71 84.36
CDX74239 Canola plastid 76.28 82.72
Bra001060.1-P Field mustard plastid 74.76 82.6
CDY28706 Canola cytosol, peroxisome, plastid 73.43 73.02
CDY51537 Canola cytosol, peroxisome, plastid 73.43 72.61
VIT_04s0023g00690.t01 Wine grape plastid 63.95 69.34
Solyc04g056560.2.1 Tomato cytosol 52.18 68.58
PGSC0003DMT400027278 Potato cytosol 52.56 67.89
PGSC0003DMT400060345 Potato plastid 57.31 64.26
Solyc05g055790.2.1 Tomato plastid 56.55 63.4
KRH45219 Soybean vacuole 11.01 61.05
AT5G36250.2 Thale cress plastid 51.23 58.44
AT1G03590.1 Thale cress cytosol, nucleus, peroxisome, plastid 41.94 47.84
AT1G16220.1 Thale cress nucleus 44.4 47.66
AT1G79630.1 Thale cress nucleus 45.16 47.22
AT5G01700.2 Thale cress cytosol, peroxisome, plastid 34.16 47.12
AT3G05640.1 Thale cress cytosol, mitochondrion, peroxisome 31.5 46.37
AT4G03415.2 Thale cress plastid 41.18 46.37
AT5G27930.1 Thale cress nucleus 31.31 44.24
AT5G26010.1 Thale cress cytosol, nucleus, peroxisome 27.32 43.5
AT4G32950.1 Thale cress cytosol 25.81 41.72
AT3G16800.2 Thale cress nucleus 27.7 41.6
AT3G06270.1 Thale cress cytosol 16.89 25.57
AT2G20050.1 Thale cress cytosol 22.01 10.6
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:35.1EntrezGene:820909ProteinID:AEE73856.1ArrayExpress:AT3G02750
EnsemblPlantsGene:AT3G02750RefSeq:AT3G02750TAIR:AT3G02750RefSeq:AT3G02750-TAIR-GEnsemblPlants:AT3G02750.3TAIR:AT3G02750.3
Unigene:At.22072GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0006464GO:GO:0006470
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538InterPro:IPR001932
InterPro:IPR036457RefSeq:NP_001030625.1PFAM:PF00481PO:PO:0000005PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832
PANTHER:PTHR13832:SF539SMART:SM00332SUPFAM:SSF81606UniParc:UPI00005DBE7DSEG:seg:
Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
Coordinates
chr3:-:593207..595755
Molecular Weight (calculated)
57677.3 Da
IEP (calculated)
4.668
GRAVY (calculated)
-0.258
Length
527 amino acids
Sequence
(BLAST)
001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPGWIILC ECMMLSCGCM MDPLIMFIGF FFIPSIELAA
301: EAERIRKCRG RVFALRDEPE VCRVWLPNCD SPGLAMARAF GDFCLKDFGL ISVPDVSFRQ LTEKDEFIVL ATDGIWDVLS NEDVVAIVAS APSRSSAARA
401: LVESAVRAWR YKYPTSKVDD CAAVCLYLDS SNTNAISTAS SISKLEDGEE EELKATTEDD DASGPSGLGR SSTVRSGKEI ALDESETEKL IKEADNLDSE
501: PGTEYSALEG VARVNTLLNL PRFVPGK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.