Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72381 | Canola | cytosol | 84.36 | 84.36 |
| CDY13509 | Canola | cytosol | 84.05 | 84.05 |
| Bra037033.1-P | Field mustard | cytosol | 84.05 | 84.05 |
| CDY28276 | Canola | cytosol | 83.44 | 83.44 |
| Bra034542.1-P | Field mustard | cytosol | 83.13 | 83.13 |
| CDY45023 | Canola | cytosol | 82.52 | 82.52 |
| PGSC0003DMT400005637 | Potato | cytosol | 34.66 | 57.95 |
| Solyc08g065670.2.1 | Tomato | peroxisome | 47.24 | 50.33 |
| VIT_04s0008g00740.t01 | Wine grape | cytosol | 53.68 | 50.14 |
| Solyc08g065500.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 50.92 | 49.4 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 49.69 | 48.94 |
| GSMUA_Achr7P09260_001 | Banana | nucleus | 47.85 | 46.85 |
| KRH52174 | Soybean | cytoskeleton, cytosol, peroxisome | 48.77 | 46.36 |
| GSMUA_Achr2P15710_001 | Banana | cytosol, peroxisome, plastid | 44.48 | 46.18 |
| Solyc08g065540.2.1 | Tomato | cytosol, nucleus, peroxisome | 46.93 | 46.08 |
| KRH05503 | Soybean | cytoskeleton, cytosol, peroxisome | 48.47 | 45.93 |
| Zm00001d009234_P001 | Maize | cytosol, peroxisome, plastid | 11.66 | 45.24 |
| KRH15511 | Soybean | cytosol, nucleus, peroxisome | 30.98 | 42.44 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 46.32 | 42.3 |
| HORVU6Hr1G039940.1 | Barley | nucleus, peroxisome, plastid | 45.71 | 42.09 |
| TraesCS6D01G178400.1 | Wheat | cytosol, nucleus, peroxisome | 45.71 | 41.5 |
| TraesCS6A01G187700.1 | Wheat | cytosol, nucleus, peroxisome | 45.71 | 41.27 |
| Zm00001d016332_P001 | Maize | cytosol, nucleus, peroxisome | 45.4 | 39.26 |
| EES04776 | Sorghum | cytosol, peroxisome, plastid | 45.4 | 38.85 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 41.1 | 37.43 |
| Os02t0224100-01 | Rice | cytosol, peroxisome, plastid | 44.48 | 37.28 |
| Solyc08g065680.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 22.39 | 35.61 |
| AT5G27930.1 | Thale cress | nucleus | 39.26 | 34.32 |
| AT3G16800.2 | Thale cress | nucleus | 35.89 | 33.33 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 38.34 | 32.72 |
| Zm00001d009620_P001 | Maize | cytosol, peroxisome, plastid | 15.95 | 32.7 |
| Zm00001d053566_P002 | Maize | nucleus, peroxisome, plastid | 43.56 | 31.28 |
| AT5G36250.2 | Thale cress | plastid | 42.33 | 29.87 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 41.1 | 29.0 |
| AT4G03415.2 | Thale cress | plastid | 39.26 | 27.35 |
| AT1G16220.1 | Thale cress | nucleus | 39.88 | 26.48 |
| AT3G02750.3 | Thale cress | plastid | 41.72 | 25.81 |
| AT1G79630.1 | Thale cress | nucleus | 39.88 | 25.79 |
| AT3G06270.1 | Thale cress | cytosol | 26.07 | 24.43 |
| AT2G20050.1 | Thale cress | cytosol | 26.38 | 7.86 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:829432 | UniProt:A0A178UYC5 |
| ProteinID:AEE86151.1 | ArrayExpress:AT4G32950 | EnsemblPlantsGene:AT4G32950 | RefSeq:AT4G32950 | TAIR:AT4G32950 | RefSeq:AT4G32950-TAIR-G |
| EnsemblPlants:AT4G32950.1 | TAIR:AT4G32950.1 | ProteinID:CAA21204.1 | ProteinID:CAB80012.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 |
| InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_195021.1 | UniProt:O82637 | ProteinID:OAO98417.1 | PFAM:PF00481 |
| PO:PO:0000037 | PO:PO:0001078 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF315 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0000048A43 |
| SEG:seg | : | : | : | : | : |
Description
Probable protein phosphatase 2C 61 [Source:UniProtKB/Swiss-Prot;Acc:O82637]
Coordinates
chr4:-:15904082..15906099
Molecular Weight (calculated)
35123.9 Da
IEP (calculated)
6.579
GRAVY (calculated)
-0.152
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFCFCLSSG GSTDKSQIYE ITDYGQENAV LYSDHHVVPQ NLGSVSSLAG GKGLNQDAAI LHLGYGTEEG ALCGVFDGHG PRGAFVSKNV RNQLPSILLG
101: HMNNHSVTRD WKLICETSCL EMDKRILKVK KIHDCSASGT TAVLAVKHGN QVMVANLGDS RAVMIGTSED GETKVAQLTN DLKPSVPSEA ERIRKRNGRV
201: LALESEPHIL RVWLPTENRP GLAMSRAFGD FLLKSYGVIA TPQVSTHQIT SSDQFLLLAS DGVWDVLSNE EVATVVMKSA SEAGAANEVA EAATNAWIQK
301: FPTVKIDDIS VVCLSLNKKH NPQPQI
101: HMNNHSVTRD WKLICETSCL EMDKRILKVK KIHDCSASGT TAVLAVKHGN QVMVANLGDS RAVMIGTSED GETKVAQLTN DLKPSVPSEA ERIRKRNGRV
201: LALESEPHIL RVWLPTENRP GLAMSRAFGD FLLKSYGVIA TPQVSTHQIT SSDQFLLLAS DGVWDVLSNE EVATVVMKSA SEAGAANEVA EAATNAWIQK
301: FPTVKIDDIS VVCLSLNKKH NPQPQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.