Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88210 | Canola | cytosol | 83.69 | 81.95 |
| CDX80553 | Canola | cytosol | 83.69 | 81.95 |
| Bra009875.1-P | Field mustard | cytosol | 83.08 | 81.36 |
| PGSC0003DMT400005637 | Potato | cytosol | 35.35 | 60.0 |
| Zm00001d009234_P001 | Maize | cytosol, peroxisome, plastid | 13.6 | 53.57 |
| Solyc08g065670.2.1 | Tomato | peroxisome | 48.94 | 52.94 |
| VIT_04s0008g00740.t01 | Wine grape | cytosol | 55.59 | 52.72 |
| KRH52174 | Soybean | cytoskeleton, cytosol, peroxisome | 52.57 | 50.73 |
| Solyc08g065540.2.1 | Tomato | cytosol, nucleus, peroxisome | 50.45 | 50.3 |
| Solyc08g065500.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 50.76 | 50.0 |
| AT4G32950.1 | Thale cress | cytosol | 48.94 | 49.69 |
| GSMUA_Achr2P15710_001 | Banana | cytosol, peroxisome, plastid | 46.83 | 49.36 |
| KRH05503 | Soybean | cytoskeleton, cytosol, peroxisome | 50.15 | 48.26 |
| GSMUA_Achr7P09260_001 | Banana | nucleus | 45.92 | 45.65 |
| KRH15511 | Soybean | cytosol, nucleus, peroxisome | 32.02 | 44.54 |
| HORVU6Hr1G039940.1 | Barley | nucleus, peroxisome, plastid | 46.83 | 43.79 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 46.83 | 43.42 |
| Solyc08g065680.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 26.89 | 43.41 |
| TraesCS6D01G178400.1 | Wheat | cytosol, nucleus, peroxisome | 46.83 | 43.18 |
| TraesCS6A01G187700.1 | Wheat | cytosol, nucleus, peroxisome | 46.53 | 42.66 |
| Zm00001d016332_P001 | Maize | cytosol, nucleus, peroxisome | 47.13 | 41.38 |
| EES04776 | Sorghum | cytosol, peroxisome, plastid | 47.13 | 40.94 |
| Os02t0224100-01 | Rice | cytosol, peroxisome, plastid | 45.92 | 39.07 |
| Zm00001d009620_P001 | Maize | cytosol, peroxisome, plastid | 18.43 | 38.36 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 39.88 | 36.87 |
| AT3G16800.2 | Thale cress | nucleus | 37.46 | 35.33 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 40.48 | 35.08 |
| Zm00001d053566_P002 | Maize | nucleus, peroxisome, plastid | 47.73 | 34.8 |
| AT5G27930.1 | Thale cress | nucleus | 38.07 | 33.78 |
| AT5G36250.2 | Thale cress | plastid | 43.5 | 31.17 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 41.99 | 30.09 |
| AT1G16220.1 | Thale cress | nucleus | 42.9 | 28.92 |
| AT4G03415.2 | Thale cress | plastid | 40.79 | 28.85 |
| AT1G79630.1 | Thale cress | nucleus | 41.99 | 27.58 |
| AT3G02750.3 | Thale cress | plastid | 43.5 | 27.32 |
| AT3G06270.1 | Thale cress | cytosol | 27.79 | 26.44 |
| AT2G20050.1 | Thale cress | cytosol | 29.0 | 8.78 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:832670 | ProteinID:AAD40128.1 |
| ProteinID:AED93513.1 | ArrayExpress:AT5G26010 | EnsemblPlantsGene:AT5G26010 | RefSeq:AT5G26010 | TAIR:AT5G26010 | RefSeq:AT5G26010-TAIR-G |
| EnsemblPlants:AT5G26010.1 | TAIR:AT5G26010.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 |
| RefSeq:NP_197973.2 | PFAM:PF00481 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0020100 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF315 | UniProt:Q9XGZ9 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI00005DC288 | SEG:seg |
Description
Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
Coordinates
chr5:-:9085247..9087585
Molecular Weight (calculated)
36523.4 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.274
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.