Factsheet for Bra034542.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45023	Canola	cytosol	97.85	97.85
Bra037033.1-P	Field mustard	cytosol	88.34	88.34
AT4G32950.1	Thale cress	cytosol	83.13	83.13
PGSC0003DMT400005637	Potato	cytosol	36.2	60.51
Solyc08g065670.2.1	Tomato	peroxisome	48.77	51.96
VIT_04s0008g00740.t01	Wine grape	cytosol	54.29	50.72
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	51.84	50.3
Bra009875.1-P	Field mustard	cytosol	50.0	48.22
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	46.32	48.09
GSMUA_Achr7P09260_001	Banana	nucleus	48.77	47.75
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	49.69	47.23
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	49.69	47.09
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	47.55	46.69
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	11.66	45.24
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	47.55	43.79
KRH15511	Soybean	cytosol, nucleus, peroxisome	31.9	43.7
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	47.85	43.45
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	47.55	43.42
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	47.85	43.21
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	47.55	41.11
EES04776	Sorghum	cytosol, peroxisome, plastid	47.55	40.68
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	45.71	38.3
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	40.8	38.22
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	22.39	35.61
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	38.65	34.9
Bra021202.1-P	Field mustard	nucleus	36.5	33.9
Bra036606.1-P	Field mustard	nucleus	38.34	33.51
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	16.26	33.33
Bra020569.1-P	Field mustard	nucleus	38.34	33.33
Bra022179.1-P	Field mustard	nucleus	35.58	33.05
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	46.01	33.04
Bra033411.1-P	Field mustard	mitochondrion	40.49	31.21
Bra035360.1-P	Field mustard	plastid	41.41	30.82
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	41.41	30.2
Bra040598.1-P	Field mustard	plastid	42.33	30.13
Bra021414.1-P	Field mustard	plastid	41.72	29.12
Bra034206.1-P	Field mustard	plastid	39.57	27.74
Bra001060.1-P	Field mustard	plastid	39.57	27.04
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	39.57	26.76
Bra035131.1-P	Field mustard	nucleus	39.88	26.69
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	11.66	26.03
Bra001189.1-P	Field mustard	plastid	26.69	24.58
Bra040230.1-P	Field mustard	cytosol	22.39	22.39
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	9.2	21.74
Bra040822.1-P	Field mustard	cytosol	26.99	9.11

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra034542	EnsemblPlants:Bra034542.1
EnsemblPlants:Bra034542.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4F0E8	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000254694B	SEG:seg	:	:	:	:

Description

AT4G32950 (E=1e-147) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA08:+:12918415..12920325

Molecular Weight (calculated)

35450.3 Da

IEP (calculated)

6.645

GRAVY (calculated)

-0.212

Length

326 amino acids

Sequence
(BLAST)

001: MGFCFCLSSG GSTDRNQIYE IKDYGQENAV LHSEQHDVHQ GFGSVSSLAG GKGYNQDAAV LHLGYGTEEG ALCGVFDGHG EKGELVSKIV RNQLPSLLLG
101: HMNNHSGTRD WKLICETTFL LMDKRILKLK NTLDCSSSGT TAVLAVTHGN QVMVANLGDS RAVMIGASEN GEIKVVQLTT DLKPSVPSEA ERIKKRNGRV
201: LALESEPHIQ RVWLPHENRP GLAMSRALGD FALKSYGVIA TPQVSTHQIT SRDQFLLLAS DGVWDVLSNE EVAVVVMKSE NEAGAANAVT EAAANAWREK
301: YPTVKVDDIS VVCLFLNKRL HPQPRM

Best Arabidopsis Sequence Match ( AT4G32950.1 )
(BLAST)

001: MGFCFCLSSG GSTDKSQIYE ITDYGQENAV LYSDHHVVPQ NLGSVSSLAG GKGLNQDAAI LHLGYGTEEG ALCGVFDGHG PRGAFVSKNV RNQLPSILLG
101: HMNNHSVTRD WKLICETSCL EMDKRILKVK KIHDCSASGT TAVLAVKHGN QVMVANLGDS RAVMIGTSED GETKVAQLTN DLKPSVPSEA ERIRKRNGRV
201: LALESEPHIL RVWLPTENRP GLAMSRAFGD FLLKSYGVIA TPQVSTHQIT SSDQFLLLAS DGVWDVLSNE EVATVVMKSA SEAGAANEVA EAATNAWIQK
301: FPTVKIDDIS VVCLSLNKKH NPQPQI

Arabidopsis Description

Probable protein phosphatase 2C 61 [Source:UniProtKB/Swiss-Prot;Acc:O82637]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.