Factsheet for Bra026075.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35072	Canola	cytosol, peroxisome, plastid	96.89	96.89
AT1G16220.1	Thale cress	nucleus	86.51	84.93
Bra035131.1-P	Field mustard	nucleus	73.03	72.28
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	45.23	62.29
GSMUA_Achr3P04090_001	Banana	plastid	54.15	57.24
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	59.75	56.36
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	16.8	56.25
GSMUA_Achr5P22360_001	Banana	plastid	53.94	55.56
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	57.26	53.59
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	57.26	53.59
Zm00001d052852_P001	Maize	plastid	56.85	52.39
Os08t0500300-01	Rice	plasma membrane	57.47	52.17
TraesCS7A01G241800.1	Wheat	nucleus	56.02	51.53
HORVU7Hr1G049260.4	Barley	nucleus	55.6	51.44
Zm00001d031329_P002	Maize	nucleus	56.64	50.09
Bra040598.1-P	Field mustard	plastid	47.1	49.56
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	56.64	49.46
Bra033411.1-P	Field mustard	mitochondrion	43.15	49.17
Bra021414.1-P	Field mustard	plastid	47.3	48.82
Solyc10g005640.2.1	Tomato	nucleus	56.02	48.56
KXG25674	Sorghum	mitochondrion	56.85	47.9
TraesCS7D01G240800.1	Wheat	mitochondrion	56.22	47.13
Bra035360.1-P	Field mustard	plastid	42.74	47.03
TraesCS7B01G137400.2	Wheat	plastid	56.02	46.96
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	43.36	46.76
Bra034206.1-P	Field mustard	plastid	43.98	45.59
Bra001060.1-P	Field mustard	plastid	44.81	45.28
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	33.2	44.32
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	31.33	43.39
Zm00001d008472_P001	Maize	cytosol	13.28	41.29
Bra036606.1-P	Field mustard	nucleus	31.95	41.29
Bra020569.1-P	Field mustard	nucleus	31.54	40.53
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	12.24	40.41
Bra034542.1-P	Field mustard	cytosol	26.76	39.57
Bra009875.1-P	Field mustard	cytosol	27.59	39.35
Bra022179.1-P	Field mustard	nucleus	28.63	39.32
Bra021202.1-P	Field mustard	nucleus	28.42	39.03
Bra037033.1-P	Field mustard	cytosol	26.35	38.96
Bra001189.1-P	Field mustard	plastid	16.6	22.6
Bra040230.1-P	Field mustard	cytosol	14.52	21.47
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	5.6	19.57
Bra040822.1-P	Field mustard	cytosol	24.07	12.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra026075	EnsemblPlants:Bra026075.1
EnsemblPlants:Bra026075.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4EBB6
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253F185	SEG:seg	:

Description

AT1G16220 (E=8e-228) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA06:+:6240271..6242111

Molecular Weight (calculated)

53206.2 Da

IEP (calculated)

5.038

GRAVY (calculated)

-0.368

Length

482 amino acids

Sequence
(BLAST)

001: MGLCSSKINK TTRSGTETTS NAITTVERQG SGRQRREKDL VSGGEIKEAE QLVGPLVGNG SSESACLYTQ QGSKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVA RRVRDMLPFT LSTQLKKTLG MDSTSVINSA TCIDEEEQWC EKDDKLPLPQ MYLPLKRALL KTCQQMDKEL KMHPTINCFC SGTTSVTVIK
201: QGKDLVVGNI GDSRAVLATR DDENALIAVQ LTIDLKPDLP SESARIQRCK GRVFALQDEP EVARVWLPNS DSPGLAMARA FGDFCLKDYG LISVPDINYR
301: RLTERDQFII LATDGVWDVL SNKEAVDIVA SAPSRNTAAR ALVCTAVRAW RLKYPTSKND DCAVVCLFLE DSASMEVSET VNHSRTESIE SVTITSSKDG
401: EKKEEALPET DEIVPVLEMK EAKTSESCRN ESKKTTTLAE CISVKDDEEW SALEGLTRVN SLLSIPRFFS GELRSGSWRK WL

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.