Factsheet for PGSC0003DMT400047180

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g054300.2.1	Tomato	plastid	98.09	98.09
PGSC0003DMT400055813	Potato	plastid	84.75	85.11
VIT_12s0059g01820.t01	Wine grape	plastid	82.42	82.24
KRH56012	Soybean	nucleus	78.6	78.77
KRH25524	Soybean	nucleus	78.6	78.77
KRH26917	Soybean	cytosol, plastid	76.27	75.95
CDY48559	Canola	plastid	70.34	75.45
CDY21964	Canola	plastid	70.13	75.4
KRH22416	Soybean	nucleus, plastid	75.64	75.16
AT4G03415.2	Thale cress	plastid	73.52	74.15
Bra034206.1-P	Field mustard	plastid	72.46	73.55
CDX89881	Canola	plastid	66.1	73.41
CDY69821	Canola	plastid	60.59	72.77
Bra033411.1-P	Field mustard	mitochondrion	64.83	72.34
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	70.13	71.64
CDY15466	Canola	cytosol, peroxisome, plastid	63.77	70.99
CDY51389	Canola	cytosol, peroxisome, plastid	63.14	70.45
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	65.89	69.57
EER99559	Sorghum	plastid	56.14	61.48
Os07t0566200-01	Rice	plasma membrane	55.51	61.36
Zm00001d006614_P001	Maize	plastid	55.51	60.65
Zm00001d021817_P001	Maize	plastid	55.08	60.32
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	54.66	59.86
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	54.24	59.81
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	54.45	59.63
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	54.45	59.63
GSMUA_Achr9P24510_001	Banana	plastid	52.75	59.29
HORVU2Hr1G084080.1	Barley	cytosol, plastid	18.43	55.77
PGSC0003DMT400005637	Potato	cytosol	22.03	53.33
PGSC0003DMT400027278	Potato	cytosol	42.37	49.02
PGSC0003DMT400060345	Potato	plastid	46.61	46.81
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	47.25	43.3
PGSC0003DMT400063747	Potato	cytosol, mitochondrion, peroxisome	31.36	40.33
PGSC0003DMT400028836	Potato	nucleus	38.14	39.82
PGSC0003DMT400030965	Potato	nucleus	37.5	39.78
PGSC0003DMT400015950	Potato	plastid	29.87	39.39
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	45.97	39.31
PGSC0003DMT400081764	Potato	cytosol	21.4	24.4

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102601638	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1BK88
PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400018314	PGSC:PGSC0003DMG400018314	EnsemblPlants:PGSC0003DMT400047180	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000295F94A	RefSeq:XP_006357501.1	SEG:seg	:	:	:

Description

Protein phosphatase-2c [Source:PGSC_GENE;Acc:PGSC0003DMG400018314]

Coordinates

chr7:-:48775381..48780704

Molecular Weight (calculated)

52381.7 Da

IEP (calculated)

5.712

GRAVY (calculated)

-0.440

Length

472 amino acids

Sequence
(BLAST)

001: MGGCVSTSNH STCSSRSNGE RVSPECLGIS MFSRKRIRKT FSDPVTTLQH LTSIPNRIFK NGKSKTSCIF TQQGRKGINQ DAMVVWEDFM AEDVTFCGVF
101: DGHGPHGHLV ARKVRDALPL KLASFLQSFD SKHNGSTANC CSVNKKLDVV DPDKDGGMED KVDYLWREAF LKSYKAMDKE LRSHPNLDCF CSGSTAITLV
201: KQGSNLFMGY IGDSRAIMAS KDSNDSMVAV QLTVDLKPDL PKEAERIKRC KGRVFALQDE PEVQRVWLPF DDAPGLAMAR AFGDFCLKEY GVISVPEFSH
301: RILTDRDKFI VLASDGVWDV LSNEEVVEIV SSAPTRASAA RILVDSAARE WKTKYPTSKM DDCAVVCLFL DGKMDSESDN EDQCFSSATL QSNHSGNAVE
401: SDDGQNSEPS LQRNFTVRSA EENNTYKRIV AEVAANQEAM STEEQNWLGL EGVTRVNSLV QLPRFSEERP RP

Best Arabidopsis Sequence Match ( AT4G03415.2 )
(BLAST)

001: MGGCVSTSSK STCSSWSNGE KPVRRPYLGI GCCVSKRAKR TFSDHIVSLQ NLTSIPNRIT SSSKSRSSCI FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT

Arabidopsis Description

PP2C52 [Source:UniProtKB/TrEMBL;Acc:A0A178UVG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.