CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021817_P001	Maize	plastid	96.06	96.06
Zm00001d006614_P001	Maize	plastid	93.27	93.06
Os07t0566200-01	Rice	plasma membrane	88.4	89.23
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	87.47	87.47
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	86.54	87.15
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	86.54	86.54
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	86.31	86.31
HORVU2Hr1G084080.1	Barley	cytosol, plastid	30.16	83.33
GSMUA_Achr9P24510_001	Banana	plastid	61.25	62.86
CDY21964	Canola	plastid	59.63	58.54
CDY48559	Canola	plastid	59.63	58.41
Bra033411.1-P	Field mustard	mitochondrion	56.61	57.68
CDX89881	Canola	plastid	56.84	57.65
KRH56012	Soybean	nucleus	62.41	57.11
KRH25524	Soybean	nucleus	62.18	56.9
KRH26917	Soybean	cytosol, plastid	62.18	56.54
KRH22416	Soybean	nucleus, plastid	62.18	56.42
PGSC0003DMT400047180	Potato	plastid	61.48	56.14
VIT_12s0059g01820.t01	Wine grape	plastid	61.48	56.03
CDY69821	Canola	plastid	51.04	55.98
Solyc07g054300.2.1	Tomato	plastid	61.25	55.93
CDY15466	Canola	cytosol, peroxisome, plastid	54.99	55.9
PGSC0003DMT400055813	Potato	plastid	60.79	55.74
Bra034206.1-P	Field mustard	plastid	59.86	55.48
Solyc10g008490.2.1	Tomato	plastid	60.32	55.44
CDY51389	Canola	cytosol, peroxisome, plastid	53.83	54.85
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	58.24	54.33
AT4G03415.2	Thale cress	plastid	58.47	53.85
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	55.45	53.47
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	35.27	43.06
EES04776	Sorghum	cytosol, peroxisome, plastid	36.66	41.47
KXG30134	Sorghum	nucleus	42.92	40.04
EES03167	Sorghum	mitochondrion	42.23	39.39
KXG25674	Sorghum	mitochondrion	51.28	38.64
EES06783	Sorghum	mitochondrion	45.94	37.93
EES07864	Sorghum	cytosol, nucleus, peroxisome	40.37	36.63
KXG22794	Sorghum	cytosol, nucleus, peroxisome	41.76	35.79
EER99809	Sorghum	plastid	23.9	22.59
EES04932	Sorghum	cytosol, plastid	29.23	11.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EntrezGene:8056348	UniProt:C5XBN0
EnsemblPlants:EER99559	ProteinID:EER99559	ProteinID:EER99559.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332	EnsemblPlantsGene:SORBI_3002G342000
SUPFAM:SSF81606	unigene:Sbi.10652	UniParc:UPI0001A8429C	RefSeq:XP_002463038.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:70857331..70861506

Molecular Weight (calculated)

46073.4 Da

IEP (calculated)

6.125

GRAVY (calculated)

-0.230

Length

431 amino acids

Sequence
(BLAST)

001: MGNCVASGGT TTVTAAGAAG EDGRRRGRRW KAPREEQLGS VPGRIFSNDG RSRTAAVFTQ QGRKGINQDA MLVWDGFGGE DDVVLCGVFD GHGPHGHLVA
101: RRVRDALPLK LMSAVRASKA GLDMPAAAWR KAFASAYKAM DKDLRSHAIL DCFCSGSTAV TVLKLGSDLY MANIGDSRAV LGSRDSGGGG GMVAVQLTVD
201: LKPDVPSEAE RIKKCRGRVF ALQDEPEVPR VWLPFDDAPG LAMARAFGDF CLKDYGVISV PEFFHWSLTE KDQFVILASD GVWDVLSNQE AVDIVASSPS
301: RSKAAKSLVE AATREWKTKY PTSKIDDCAV VCLYLDGKMD HERDSTASMD NISLEGSVAD PNEAPEQEPA LTRNFTVRTV AGSAHEKALS GAVDAVVAGA
401: AHDQNWSGLD GVTRVNSLVQ LPRFSEEKAI G

Best Arabidopsis Sequence Match ( AT4G03415.2 )
(BLAST)

001: MGGCVSTSSK STCSSWSNGE KPVRRPYLGI GCCVSKRAKR TFSDHIVSLQ NLTSIPNRIT SSSKSRSSCI FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT

Arabidopsis Description

PP2C52 [Source:UniProtKB/TrEMBL;Acc:A0A178UVG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.