CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053313_P005	Maize	cytosol, plastid	95.01	94.83
Os02t0281000-01	Rice	cytosol	83.92	83.61
TraesCS6B01G231400.1	Wheat	plastid	81.33	81.03
TraesCS6D01G174700.1	Wheat	plastid	81.24	80.94
TraesCS6A01G191000.1	Wheat	plastid	80.5	80.2
HORVU6Hr1G040540.8	Barley	peroxisome, plastid	73.94	74.56
GSMUA_Achr10P...	Banana	cytosol	64.79	68.46
VIT_11s0016g03430.t01	Wine grape	cytosol	65.53	65.47
Bra040822.1-P	Field mustard	cytosol	58.23	65.22
Solyc05g018300.2.1	Tomato	cytosol	62.29	62.41
KRH39350	Soybean	cytosol	61.83	62.23
CDY05716	Canola	cytosol	61.55	61.84
CDY35922	Canola	cytosol	61.65	61.7
KRH76332	Soybean	cytosol	61.74	60.95
AT2G20050.1	Thale cress	cytosol	61.09	60.42
EER99809	Sorghum	plastid	16.54	39.25
EER99559	Sorghum	plastid	11.65	29.23
EES04776	Sorghum	cytosol, peroxisome, plastid	9.61	27.3
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	8.13	24.93
KXG30134	Sorghum	nucleus	9.43	22.08
EES07864	Sorghum	cytosol, nucleus, peroxisome	9.61	21.89
KXG25674	Sorghum	mitochondrion	11.46	21.68
EES03167	Sorghum	mitochondrion	9.15	21.43
KXG22794	Sorghum	cytosol, nucleus, peroxisome	9.52	20.48
EES06783	Sorghum	mitochondrion	9.15	18.97

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.510.10	Gene3D:2.60.120.10	Gene3D:3.30.200.20	Gene3D:3.60.40.10
MapMan:50.2.7	EntrezGene:8060394	UniProt:C5Y043	EnsemblPlants:EES04932	ProteinID:EES04932	ProteinID:EES04932.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004721	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR000595
InterPro:IPR000719	InterPro:IPR001932	InterPro:IPR014710	InterPro:IPR036457	InterPro:Kinase-like_dom_sf	PFAM:PF00027
PFAM:PF00069	PFAM:PF00481	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PRINTS:PR00103
ScanProsite:PS01032	PFscan:PS50011	PFscan:PS50042	PFscan:PS51746	PANTHER:PTHR24353	PANTHER:PTHR24353:SF115
InterPro:Prot_kinase_dom	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00220	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G127800
SUPFAM:SSF51206	SUPFAM:SSF56112	SUPFAM:SSF81606	UniParc:UPI0001A8539E	RefSeq:XP_002451956.1	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:16033868..16041705

Molecular Weight (calculated)

120078.0 Da

IEP (calculated)

4.679

GRAVY (calculated)

-0.232

Length

1082 amino acids

Sequence
(BLAST)

0001: MGCSASKCCS QLKCSLCSNG CLGQAPDSPR ESRGKSSRGR GKADYTDSDD SSDDLGEDDD AFNHMNATRE STVGISRLSR VSSQFLPPDG SRKIQVPLGN
0101: YDMTYSFLSQ RGYYPESLDK ANQDSYCIHT PFGPSPDDHF FGVFDGHGEY GAQCSQFVKR RLCENLLRDN RFRTDAVLAL HSAFITTNSQ LHADNLDDSM
0201: SGTTAVTILV RGKTIYVANT GDSRAVIAEK RGDDIVAVDL SIDQTPYRFD ELERVKECGA RVLTLDQIEG LKNPDVQCWG TEESDDGDPP RLWVQNGMYP
0301: GTAFTRSIGD SVAESIGVIA DPEIFVLDLN SNNPFFVLAS DGVFEFLSSQ TVVDMISKYK DPRDACAEIV AESYRLWLQY ETRTDDITII VVHINGLTDE
0401: STQTVTKVTL QPSQQVVGLA GSESPLIVSS NTNNQRSRHD LSRARLRALE SSLENGQLWV PPSPSHRKTW EEQAHIERVL HDHFLFRKLT DSQCHVLLDC
0501: MQRVEVKPGD IVVQQGGEGD CFYVVGSGEY EVLAIQEENG KEITKVLHRY TSDKLSSFGE LALMHNKPLQ ASVRAVTSGT LWALKREDFR GILMSEFSNI
0601: PSLKLLRSVE LFTRFTVLQL SQLAESLVEV SFADGQKIVD KNDDVSSLYV IQRGRVRLFL ATGEMTSDTW DLISAQTKQA QSSRENGNYV VEIDEGGHFG
0701: EWSLIGETIA FTAIAVGDVT CSTITKEKFD SIVGPLPKLP QVDSKIKESL VTEENLADGD FPFRRVKLSD LEWKMCIYAA DCSEIGLVQV RGSDKIRSLK
0801: RFYIKRVQDL HKEVQVFEEK DLMKSLSKST CVPEVLSTCA DQSYLGIVLN CCLCCSLASI LHTPLNESSA KFFAASVVVA LEELHQKSII YRGVSADILM
0901: LDRSGHLQLV DFRFAKKLEG QRTYTICGIA DSLAPEIVLG RGHGFAADWW ALGVLIYFML QSDMPFGSWR ESELEPITKI AKGRLVMPVS FSAEVVDLIT
1001: KLLVVDENAR LGTSGAEAVK KHAWFDGIDW EQIASGTCAV PEEITERINS CIETLNEDLS ASTSVPIEDP DVLTAPEWIQ DW

Best Arabidopsis Sequence Match ( AT2G20050.1 )
(BLAST)

0001: MGCAYSKTCI GQICATKENS IRQTHQQAPS RGGTRATAAA AAVEEDNPVF NFSSDAVDDV DNDEIHQLGL SRDQEWGITR LSRVSSQFLP PDGSRVVKVP
0101: SCNYELRCSF LSQRGYYPDA LDKANQDSFA IHTPFGSNSD DHFFGVFDGH GEFGAQCSQF VKRRLCENLL RHGRFRVDPA EACNSAFLTT NSQLHADLVD
0201: DSMSGTTAIT VMVRGRTIYV ANAGDSRAVL AEKRDGDLVA VDLSIDQTPF RPDELERVKL CGARVLTLDQ IEGLKNPDVQ CWGTEEDDDG DPPRLWVPNG
0301: MYPGTAFTRS IGDSIAETIG VVANPEIAVV ELTPDNPFFV VASDGVFEFI SSQTVVDMVA KHKDPRDACA AIVAESYRLW LQYETRTDDI TIIVVHIDGL
0401: KDDAPRQLSS TGTQLQPPIP QVVELTGSES PSTFGWNSKN QRVRHDLSRA RIRAIENSLE NGHAWVPPSP AHRKTWEEEA HIERVLRDHF LFRKLTDSQC
0501: QVLLDCMQRL EANPGDIVVK QGGEGDCFYV VGSGEFEVLA TQDGKNGEVP RILQRYTAEK QSSFGELALM HNKPLQASVR AVDHGTLWAL KREDFRGILM
0601: SEFSNLASLK LLRSVDLLSR LTILQLSHVA ESLSEACFSD GQTIVTKDQK LQGLYVIQKG RVKISFCTEV LESQNVSSLT TGITNEYDNL EIGTEVSIEK
0701: HEGSYFGEWA LLGELKDSLS VVAVGEVVCV VLTKENFESA VGPLTNISDD GPKTRHSSFE LSKESAKVTD TTALAKATLA DLEWTTCLST TDCSEIGLVH
0801: LKDKENLLSL KRFSKQKVKK LGKEAQVLKE RNLMKNVIKP SAIVPEILCT CVDQTFAAIL LNTTLACPIS SLLHSPLDES SVRFITGSLV SAIEDIHKNE
0901: ILFRGSSPEL LMLDQSGYLQ IVDFRFAKKL SGERTFTICG NADYLAPEIV QGKGHGYAAD WWALGVLIYY MLEGEMPFGS WRESELDTFQ KIAKGQLTFP
1001: RVLSSEAEDL ITKLLEVDEN LRFGSQGGPE SIKKHPWFNG LKWEAISNRE FQVPQEIISR IHHHLENDNV LPLETSKSLD TTEDQDAQNW LEEW

Arabidopsis Description

Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SL76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.