CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053259_P003	Maize	mitochondrion	87.74	91.6
Zm00001d016474_P001	Maize	mitochondrion	90.23	89.54
TraesCS6A01G193100.1	Wheat	mitochondrion	73.18	73.75
Os02t0471500-01	Rice	cytosol, mitochondrion, plasma membrane	72.8	73.36
TraesCS6B01G229600.1	Wheat	mitochondrion	72.8	73.36
TraesCS6D01G181000.1	Wheat	mitochondrion	72.8	73.36
HORVU6Hr1G043680.5	Barley	mitochondrion, plastid	72.03	73.01
EES03167	Sorghum	mitochondrion	58.05	65.58
EER99559	Sorghum	plastid	37.93	45.94
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	28.54	42.21
KXG30134	Sorghum	nucleus	37.36	42.21
EES04776	Sorghum	cytosol, peroxisome, plastid	29.69	40.68
KXG25674	Sorghum	mitochondrion	41.95	38.29
EES07864	Sorghum	cytosol, nucleus, peroxisome	33.91	37.26
KXG22794	Sorghum	cytosol, nucleus, peroxisome	34.29	35.59
EER99809	Sorghum	plastid	18.58	21.27
EES04932	Sorghum	cytosol, plastid	18.97	9.15

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EntrezGene:8084505	UniProt:C5Y185
EnsemblPlants:EES06783	ProteinID:EES06783	ProteinID:EES06783.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G143700
SUPFAM:SSF81606	unigene:Sbi.12622	UniParc:UPI0001A85A0A	RefSeq:XP_002453807.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:42911754..42916991

Molecular Weight (calculated)

55518.8 Da

IEP (calculated)

7.075

GRAVY (calculated)

-0.185

Length

522 amino acids

Sequence
(BLAST)

001: MVEAAAGRRP GTSRRRPSGS GGEHQRLVAL AVAARVAMVT TRSAGPAVAG GDGAGTAGTG AGAAGGSGRC MEDFFDCLLG LLGALGMTWA AARPQRQPRP
101: PLPRGVGAGA VPTDARRFAA ELRATPGRIA GNGACTVASL YTLQGKKGVN QDAMIVWENF CSRDDTIFCG VFDGHGPYGH LVAKRVRDLL PLKLGADLGT
201: EDGRVTSTGN IKLNTHDVAS PEHKDRGGTA ISSETQQNGE YPEIFPALRT SFLKAFHVMD RDLKLHKNID CFFSGTTAVA VIKQGRNLII GNLGDSRAVL
301: GTRDENNELV AVQLTVDLKP NIPSEAQRIR QRRGRIFALP EEPEVARVWL PKYNSPGLAM ARAFGDFCLK DHGVISMPDV SYHHITEKDE FVVLATDGVW
401: DVLSNDEVVS TVSQATSRAS AARFLVETAH RAWRTRFPTS KIDDCAVVCL FLNTNEASES SSSLANNLAD AVEVSSAQRS TTIQVSTGAS IDVTALVTDG
501: NEESVVETVT RPVTLMDLPK DG

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.