Factsheet for Solyc01g080400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081764	Potato	cytosol	99.03	99.03
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	25.12	75.36
VIT_05s0020g02360.t01	Wine grape	cytosol	68.12	72.49
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.16	72.15
AT3G06270.1	Thale cress	cytosol	60.63	72.13
CDY08060	Canola	plastid	60.14	70.34
Bra040230.1-P	Field mustard	cytosol	55.07	69.94
CDY18847	Canola	cytosol	54.83	69.63
CDX74112	Canola	plastid	59.42	69.49
Bra001189.1-P	Field mustard	plastid	59.18	69.21
KRH50972	Soybean	cytosol	68.36	66.9
KRH02158	Soybean	cytosol	65.94	65.62
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	67.87	65.2
KRH20951	Soybean	plastid	67.87	65.2
GSMUA_Achr10P...	Banana	mitochondrion	60.14	56.59
GSMUA_Achr8P05980_001	Banana	cytosol	53.38	55.39
GSMUA_Achr3P24900_001	Banana	cytosol	47.1	52.0
Os07t0646100-00	Rice	plasma membrane	45.65	50.53
TraesCS2D01G144500.3	Wheat	cytosol	48.31	43.38
TraesCS2A01G141100.2	Wheat	cytosol	48.79	43.07
EER99809	Sorghum	plastid	47.34	42.98
TraesCS2B01G166100.3	Wheat	cytosol	48.31	42.83
Zm00001d007050_P001	Maize	mitochondrion	46.14	42.07
Zm00001d022347_P001	Maize	mitochondrion	46.38	41.56
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	40.82	31.3
Solyc08g065670.2.1	Tomato	peroxisome	21.74	29.41
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	22.95	28.61
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	21.74	26.79
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	12.8	25.85
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	22.71	25.61
Solyc01g065700.2.1	Tomato	nucleus	21.5	24.65
Solyc10g076320.1.1	Tomato	nucleus	22.46	21.33
Solyc05g055790.2.1	Tomato	plastid	23.91	21.06
Solyc07g054300.2.1	Tomato	plastid	23.91	20.97
Solyc04g056560.2.1	Tomato	cytosol	20.29	20.95
Solyc10g008490.2.1	Tomato	plastid	23.67	20.9
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	21.98	20.09
Solyc05g018300.2.1	Tomato	cytosol	52.17	20.0
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	22.22	17.86
Solyc10g005640.2.1	Tomato	nucleus	22.95	17.09

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4AXT4
PFAM:PF00481	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR24353	PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc01g080400.2	EnsemblPlants:Solyc01g080400.2.1
UniParc:UPI0002762345	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:79647010..79652464

Molecular Weight (calculated)

45153.2 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.406

Length

414 amino acids

Sequence
(BLAST)

001: MGCVHGKCCC RYPRSSDGDN REDLGRYAQV QTHILAGRSV ESAQVPSHNF RLEYSVLTQR GFYPESPEKE NQDSYCIRTQ LQGNPNVHFF GVFDGHGQFG
101: TECSVFVRDR LVEILSNDST LLDDPVKAYN SAFSITNEEL HDSEIDDSMS GTTAITALLV GDMLYVANVG DSRAVMAVKE GNRVVAKDLS SDQTPFRKDE
201: CERVKSCGAR VLSVDQVEGL KDPDIQSWGD EETEGGDPPR LWVQNGMYPG TAFTRSVGDS TAESIGVVAV PEVTTVHLTA HHPFFVVASD GVFEFLSSQT
301: VVDMVNRAAD PRDASSAIAG ESYKLWLDHE NRTDDITIII VHIKALSNSG GGATAKRNGG RTTNTEKETS EIYFTPSASE GYRSVRSELS EVSCCQTVPS
401: SDQSSRVVVS SSLD

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.