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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34568 Canola cytosol 37.06 90.0
CDY46975 Canola cytosol, mitochondrion, peroxisome 77.35 84.57
CDX91383 Canola cytosol 77.94 82.81
CDX97493 Canola cytosol 78.24 80.12
CDY72270 Canola cytosol 48.24 77.73
CDY00978 Canola cytosol 79.12 76.64
CDY70364 Canola cytosol, peroxisome 77.94 73.2
CDY37649 Canola mitochondrion, plastid 80.0 63.26
CDY63003 Canola mitochondrion, plastid 80.29 62.33
AT5G36250.2 Thale cress plastid 76.47 56.28
KRH45221 Soybean cytosol, mitochondrion, peroxisome 23.82 47.37
KRH36356 Soybean cytosol 28.24 46.15
CDY53741 Canola plastid 52.94 38.54
CDY53743 Canola plastid 52.94 38.46
KRG93121 Soybean plastid 41.18 38.36
CDX92009 Canola plastid 51.76 37.21
CDY69821 Canola plastid 42.65 36.9
KRH01535 Soybean cytosol 49.12 36.7
CDY50503 Canola nucleus 37.65 36.47
CDY67911 Canola nucleus 37.65 36.47
CDY40298 Canola cytosol, peroxisome, plastid 38.53 36.29
CDX74239 Canola plastid 51.47 36.01
CDX95903 Canola nucleus 36.18 35.04
CDY51537 Canola cytosol, peroxisome, plastid 54.41 34.71
CDY28706 Canola cytosol, peroxisome, plastid 53.82 34.53
CDX92097 Canola nucleus 35.29 34.19
CDY18810 Canola cytosol, nucleus, peroxisome 34.71 33.91
CDX80553 Canola cytosol 33.53 33.73
CDX88210 Canola cytosol 33.24 33.43
CDX89881 Canola plastid 41.76 33.41
CDY33350 Canola cytosol, nucleus, plastid 47.06 33.33
CDY51389 Canola cytosol, peroxisome, plastid 41.47 33.33
CDY15466 Canola cytosol, peroxisome, plastid 41.47 33.25
CDY35072 Canola cytosol, peroxisome, plastid 47.06 33.2
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 37.35 32.99
CDX88554 Canola nucleus 46.18 32.85
CDY21964 Canola plastid 42.35 32.8
CDY48559 Canola plastid 42.35 32.73
CDY05554 Canola nucleus 35.29 32.61
CDX87369 Canola nucleus 46.76 32.32
CDY53338 Canola cytosol, mitochondrion, nucleus 35.29 32.17
CDY19742 Canola nucleus 35.29 32.17
CDY25013 Canola nucleus 35.0 31.73
CDY28276 Canola cytosol 30.0 31.29
CDY45023 Canola cytosol 30.0 31.29
CDX72381 Canola cytosol 29.71 30.98
CDY13509 Canola cytosol 29.41 30.67
KRH45222 Soybean nucleus 14.71 21.55
CDY08060 Canola plastid 20.29 19.49
CDX74112 Canola plastid 20.0 19.21
CDY18847 Canola cytosol 17.65 18.4
CDX82702 Canola nucleus 17.35 13.11
CDY05716 Canola cytosol 23.24 7.34
CDY35922 Canola cytosol 23.24 7.31
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078J0H9UniProt:A0A078J0H9
EnsemblPlants:CDY56581ProteinID:CDY56581ProteinID:CDY56581.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00019762001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF510SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EF0BB5::::
Description
BnaCnng30680DBnaCnng30680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0H9]
Coordinates
chrLK033501:-:45907..47643
Molecular Weight (calculated)
38467.4 Da
IEP (calculated)
8.062
GRAVY (calculated)
-0.208
Length
340 amino acids
Sequence
(BLAST)
001: MIVWENFGSM EDTVFCGVFD GHGPYGHVIA KRVRDLLPLK LGSHLESYLS CEEVLKEISL NTADRMTSDS LVQISANGES RIYNKDQDMV QMLLTSIVKA
101: YRFMDKELKM QVDVDCFCSG TTAVTMVKQG QHLVVGNIGD SRAVLGTRNK ENKLVPFQLT EDFKPDVPAE AARIKRCRGR IFALRDEPGV ARLWLPNYNS
201: PGLTMARAFG DFCLKDFGLI SVPDVSYRRL IEKDEFVVLA TDWIWDVLTN EEVVEIVAKA PTRCTAVRAL VEAAFASSLT RNQTNYQLLL SQWINTSAMA
301: LLNLIQHQRQ LQAREPIHLS SMVPKSRQNR HTRDNQRVGR
Best Arabidopsis Sequence Match ( AT5G36250.3 )
(BLAST)
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG VRNIQAQCQN KCGLVSSFS
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.