Factsheet for GSMUA_Achr9P07440_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27920_001	Banana	mitochondrion	63.73	67.01
GSMUA_Achr8P28420_001	Banana	plastid	67.16	66.5
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	23.04	65.28
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	18.63	61.29
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	48.28	56.29
GSMUA_Achr9P01810_001	Banana	plastid	59.07	55.4
GSMUA_Achr8P17470_001	Banana	plastid	61.52	53.75
GSMUA_Achr3P04090_001	Banana	plastid	57.84	51.75
GSMUA_Achr5P22360_001	Banana	plastid	56.37	49.15
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	36.76	47.77
GSMUA_Achr9P24510_001	Banana	plastid	48.77	47.38
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	39.95	46.57
GSMUA_Achr7P09260_001	Banana	nucleus	37.75	46.25
GSMUA_Achr11P...	Banana	mitochondrion	38.73	46.2
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	45.59	44.18
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.95	27.85
GSMUA_Achr3P24900_001	Banana	cytosol	24.02	26.13
GSMUA_Achr8P05980_001	Banana	cytosol	23.53	24.06
GSMUA_Achr10P...	Banana	mitochondrion	23.77	22.05
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	22.55	17.04
GSMUA_Achr10P...	Banana	cytosol	23.04	9.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G07440_001	EnsemblPlants:GSMUA_Achr9P07440_001	EnsemblPlants:GSMUA_Achr9T07440_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TYA3	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000296A48F
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 33 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07440_001]

Coordinates

chr9:+:4714877..4719128

Molecular Weight (calculated)

45099.3 Da

IEP (calculated)

5.228

GRAVY (calculated)

-0.405

Length

408 amino acids

Sequence
(BLAST)

001: MGSCLSSDGR SSDSRPSSPA TGARRHRRGP RKRPRGLSEE EQQLHGIPGR MFLNGASSAA SLFTQQGKKG TNQDAMIVWE LFWMSMTAIY CTEYNFGNRS
101: DTVFCGVFDG HGPNGHMVAR KVRDILPLKL CASWEANTGN DEDSETLTTL EDSFLKAFRV VDKELRLHPD IECIYSGTTA VTLVKQGQDL VIGNVGDSRA
201: VLGTRDHNNS LIPVQLTVDL KPNLPREAER IRRCRGRVFA LRDEPEVARV WLPNIDSPGL AMARALGDFC LKKFGLISVP EITYRRVTEK DEFIVLATDG
301: VWDVLSNQEV VEIVDTAPTR SSAARYLVET AVRAWRIKYP TSKIDDCAVV CLFLDVESSN GSSIERTNEG DGPLDGMELA GSTSLDQSST LGACTEIQQY
401: KEDQEKDN

Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.