Factsheet for HORVU4Hr1G044610.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G159700.1	Wheat	cytosol	97.72	97.72
TraesCS4B01G162100.1	Wheat	cytosol, mitochondrion, peroxisome	96.8	96.8
Os11t0417400-01	Rice	plasma membrane	79.68	80.79
Zm00001d050614_P001	Maize	cytosol, nucleus, peroxisome	74.66	71.4
KXG30134	Sorghum	nucleus	75.11	71.21
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	36.53	45.2
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	44.29	45.01
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	42.01	42.89
HORVU7Hr1G049260.4	Barley	nucleus	49.77	41.84
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	32.88	40.91
HORVU6Hr1G043680.5	Barley	mitochondrion, plastid	45.66	38.84
HORVU1Hr1G059130.3	Barley	mitochondrion	32.88	38.2
HORVU2Hr1G084080.1	Barley	cytosol, plastid	12.56	35.26
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	20.78	34.21
HORVU6Hr1G040540.8	Barley	peroxisome, plastid	23.06	9.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	UniProt:A0A287NWL4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G044610	EnsemblPlants:HORVU4Hr1G044610.4	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF289	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000B476179	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:358054764..358061365

Molecular Weight (calculated)

47801.7 Da

IEP (calculated)

7.216

GRAVY (calculated)

-0.397

Length

438 amino acids

Sequence
(BLAST)

001: MGSCLPADQR PMEVTALPGK VGGGRRRGEE APGRIAGIGT GNVACLFTRQ GKKGTNQDAM VAWENFNGRS DTVFCGVFDG HGPHGHLVAR KVRDTLPLKL
101: CDLIYDDYGA SPISNSDGSV LEESLSPYPD AGDKSPTFTA QKEEHLEFFD SMKESFRKAF RVMDKELKLH RNIDSICSGT TAVTLIKQGQ DLFVGNLGDS
201: RAVLGTRDQN GHLVAHQLTV DLKPDHPREA RRIKRCNGRV FAHQDEPDVA RLWLPNCNSP GLAMARAFGD FCLKDFGLIS VPEVTYRRIM EKDQFIVLAT
301: DGVWDVLSNQ EVVEVVASCS GRSGAARAVV DLANQTWKFK YPTSKTDDCA VICLFLSKDA AAGGLSGLSV ASKGIGSNPR MPTRLRTPQH FSKRVIPEDA
401: DDECDPNISG DERSLEGFTR LNTLLTLPKF GDTSPTKK

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.