Factsheet for TraesCS2D01G273100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G274100.1	Wheat	mitochondrion	98.3	98.48
TraesCS2B01G291800.1	Wheat	mitochondrion	98.3	98.3
EES03167	Sorghum	mitochondrion	60.3	69.05
Os04t0321800-02	Rice	peroxisome	57.28	65.87
Zm00001d011195_P001	Maize	mitochondrion	60.87	65.58
TraesCS6D01G181000.1	Wheat	mitochondrion	54.82	55.98
TraesCS4D01G159700.1	Wheat	cytosol	37.62	45.43
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	28.92	42.62
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	33.27	40.84
TraesCS1D01G229600.2	Wheat	mitochondrion	27.22	39.24
TraesCS1D01G229700.1	Wheat	mitochondrion	27.03	38.86
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	27.03	38.86
TraesCS5D01G155800.1	Wheat	cytosol	31.0	38.41
TraesCS7D01G240800.1	Wheat	mitochondrion	39.32	36.17
TraesCS2D01G144500.3	Wheat	cytosol	16.82	19.31
TraesCS6D01G174700.1	Wheat	plastid	18.71	9.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS2D01G273100	EnsemblPlants:TraesCS2D01G273100.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:338693290..338701353

Molecular Weight (calculated)

56357.0 Da

IEP (calculated)

8.101

GRAVY (calculated)

-0.190

Length

529 amino acids

Sequence
(BLAST)

001: MVAVAAGRRP VLSRRRSGCG AGQQQLQHPQ AQQQRMLAVA VAARVAAARP AATEAALYGG GGGGDGCCVD FLVCLLRGLG VTPASAGPAQ FKWAARPLRR
101: KRNGGSSPSG ASAEERRPEL IRGAPGRIAG NGACASASLY TMQGKKGVNQ DAMVVVENFG SKDGTIFCGV FDGHGPQGHL VSKMVRDLLP VKLSANIARD
201: EYKELSNNRV TNGTTEGDAV QTVVEDTDAT LGAVENGGYP EIFTALRTSF LRAFYVMDRD LKSHKNIDCL FSGTTAVTLI KQGQDLIIGN LGDSRAILAT
301: KDEDNHLFAL QLTVDLKPSI PSEAARIRER KGRVFSLPNE PDVTRVWLPK YNSPGLAMAR AFGDFCLKSY GVISVPDVSY HHITEKDEFV VLATDGVWDV
401: LSNDDVVKIV SESTSEASAA RLLVQTAHRT WRTRFPTAKV DDCAAVCLFL KTDLTNKSSD SGTKDFATNV ELDGGKHFST VKSSTVVPTD LATAFVTGKE
501: WPVLSGDPMP ATPTNLLTPT SAANQSMEG

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.