Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 3
- plastid 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0758000-01 | |
| Os06t0219500-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08520.1 | Os02t0758000-01 | AT4G25200.1 | 21798944 |
| AT4G08520.1 | Os06t0219500-00 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037861.1-P | Field mustard | extracellular | 40.24 | 23.91 |
| Os02t0317400-01 | Rice | cytosol | 52.44 | 23.63 |
| KXG35813 | Sorghum | cytosol | 51.22 | 23.08 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 50.0 | 22.53 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 50.0 | 22.53 |
| Bra029790.1-P | Field mustard | cytosol | 40.24 | 22.45 |
| Solyc02g071170.2.1 | Tomato | plastid | 47.56 | 22.03 |
| KRH11718 | Soybean | endoplasmic reticulum | 47.56 | 21.79 |
| PGSC0003DMT400007924 | Potato | cytosol | 46.34 | 21.47 |
| KRH36712 | Soybean | endoplasmic reticulum | 46.34 | 21.23 |
| VIT_09s0002g01710.t01 | Wine grape | cytosol | 46.34 | 20.77 |
| Zm00001d020783_P005 | Maize | mitochondrion | 51.22 | 20.69 |
| AT1G60970.1 | Thale cress | cytosol | 43.9 | 20.34 |
| Solyc12g044910.1.1 | Tomato | cytosol | 45.12 | 20.22 |
| PGSC0003DMT400083870 | Potato | cytosol | 45.12 | 20.22 |
| Os01t0838800-02 | Rice | cytosol | 42.68 | 19.77 |
| KRH44115 | Soybean | cytosol | 42.68 | 19.44 |
| KRH23291 | Soybean | endoplasmic reticulum | 42.68 | 19.34 |
| Os05t0461000-01 | Rice | cytosol | 41.46 | 19.21 |
| Bra027107.1-P | Field mustard | cytosol | 41.46 | 19.21 |
| PGSC0003DMT400006628 | Potato | cytosol | 42.68 | 19.02 |
| VIT_10s0003g02760.t01 | Wine grape | cytosol | 46.34 | 19.0 |
| AT4G08520.1 | Thale cress | cytosol | 41.46 | 18.78 |
| CDY36196 | Canola | cytosol | 41.46 | 18.78 |
| CDY44731 | Canola | cytosol | 41.46 | 18.78 |
| CDY41585 | Canola | cytosol | 41.46 | 18.78 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 51.22 | 18.67 |
| Bra001298.1-P | Field mustard | cytosol | 41.46 | 18.48 |
| CDX73995 | Canola | cytosol | 41.46 | 18.48 |
| Solyc03g121800.2.1 | Tomato | plastid | 41.46 | 18.48 |
| CDX75151 | Canola | cytosol | 40.24 | 18.23 |
| KRH47095 | Soybean | endoplasmic reticulum | 41.46 | 18.09 |
| CDY22204 | Canola | cytosol | 40.24 | 17.93 |
| CDY41313 | Canola | cytosol | 39.02 | 17.39 |
| CDY12879 | Canola | mitochondrion | 41.46 | 14.29 |
| CDY07940 | Canola | cytosol | 41.46 | 14.23 |
| AT3G09800.6 | Thale cress | cytosol | 42.68 | 13.51 |
| CDY44831 | Canola | cytosol, mitochondrion | 37.8 | 13.25 |
Protein Annotations
| EnsemblPlants:Os09t0251450-00 | EnsemblPlantsGene:Os09g0251450 | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF17 | ProteinID:BAT07051.1 | UniParc:UPI000393A72C |
| UniProt:A0A0P0XKF5 | MapMan:35.2 | : | : | : | : |
Description
Similar to Coatomer subunit zeta-2. (Os09t0251450-00)
Coordinates
chr9:-:3933261..3935104
Molecular Weight (calculated)
9554.7 Da
IEP (calculated)
6.224
GRAVY (calculated)
0.429
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: WPYAYFVIYK FVQELHFCIT AGDGDNEVII LQGSSDSVVQ FTVLLGDVEK TAALKNLDMI LLSYMVGKYF LWSMLRLHHR FF
001: MFLNGHGQMN RISINYKNRS DEIKHSDPDK QCDTETAKGA LSHSEAISSV STILRFSHLN PPIHYFFSDL LFRYISSLTT MSPDSCPLVK KILLLDSEGK
101: RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA VALLLRSNVE KMEALENLDL
201: IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA VALLLRSNVE KMEALENLDL
201: IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.