Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41313 | Canola | cytosol | 98.91 | 98.91 |
| CDX73995 | Canola | cytosol | 96.74 | 96.74 |
| CDY41585 | Canola | cytosol | 94.02 | 95.58 |
| CDY44731 | Canola | cytosol | 94.02 | 95.58 |
| CDX75151 | Canola | cytosol | 87.5 | 88.95 |
| CDY36196 | Canola | cytosol | 86.96 | 88.4 |
| PGSC0003DMT400006628 | Potato | cytosol | 74.46 | 74.46 |
| CDY07940 | Canola | cytosol | 96.2 | 74.06 |
| Solyc03g121800.2.1 | Tomato | plastid | 73.91 | 73.91 |
| VIT_09s0002g01710.t01 | Wine grape | cytosol | 72.83 | 73.22 |
| KRH44115 | Soybean | cytosol | 71.2 | 72.78 |
| KRH23291 | Soybean | endoplasmic reticulum | 70.11 | 71.27 |
| PGSC0003DMT400083870 | Potato | cytosol | 70.65 | 71.04 |
| Solyc12g044910.1.1 | Tomato | cytosol | 70.65 | 71.04 |
| Os02t0317400-01 | Rice | cytosol | 68.48 | 69.23 |
| KXG35813 | Sorghum | cytosol | 67.93 | 68.68 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 66.85 | 67.58 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 66.3 | 67.03 |
| AT3G09800.6 | Thale cress | cytosol | 91.3 | 64.86 |
| Zm00001d020783_P005 | Maize | mitochondrion | 69.02 | 62.56 |
| KRH47095 | Soybean | endoplasmic reticulum | 63.59 | 62.23 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 66.3 | 54.22 |
| CDY44831 | Canola | cytosol, mitochondrion | 65.76 | 51.71 |
| CDY12879 | Canola | mitochondrion | 66.85 | 51.68 |
| Os09t0251450-00 | Rice | extracellular | 17.93 | 40.24 |
Protein Annotations
| EnsemblPlants:CDY22204 | EnsemblPlantsGene:GSBRNA2T00018624001 | Gene3D:3.30.450.60 | GO:A0A078G9Z8 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | PFAM:PF01217 | ProteinID:CDY22204 | ProteinID:CDY22204.1 | SUPFAM:SSF64356 |
| UniParc:UPI0004EB8789 | UniProt:A0A078G9Z8 | MapMan:22.3.1.4.4 | : | : | : |
Description
BnaC01g38970DBnaC01g38970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9Z8]
Coordinates
chrLK032128:-:530693..532328
Molecular Weight (calculated)
20235.1 Da
IEP (calculated)
4.400
GRAVY (calculated)
0.022
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGFHGTNDS CPLVKNILLL DSEGKRVAVK YYSDDWSTHA AKLSFEKLVF SKTSKTNART EAEITLLDSN VIVYKFAQDL HFFVTGGEDE NELVLSSVLQ
101: GFFDAVALLL RNNVEKMEAL ENLDLIFLCL DEMVDQGVVL ETDPNVIAGK VAMQSTEASG SLSEQTLTQA LATAREHLAR SLLT
101: GFFDAVALLL RNNVEKMEAL ENLDLIFLCL DEMVDQGVVL ETDPNVIAGK VAMQSTEASG SLSEQTLTQA LATAREHLAR SLLT
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.